NONHSAT075397
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075397 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
744 nt |
Genomic location |
chr2-:171190523..171201438 |
Exon number |
6 |
Exons |
171190523..171190641,171191256..171191389,171194359..171194423,171199969..171200166,171200851..171200948,171201309..171201438 |
Genome context |
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Sequence |
000001 AGATCAGCCC TGGGGTTCAG AGGGATCCTG ACAGCTACTC CTCAAGATCC TCTCTGTTGT GATTCATCCC CCCGGGGCCC 000080
000081 TACAGTTTCT CCTTCCTGAC TCTTACATTT CTTTGGATGG CATCATTATT gctggagtgc agtgatgtga tctcggctca 000160 000161 ctgcaacccc tgcctcctgg attcaagcaa ttctcctgcc tcaccctccc aagtagctgg gattacagTA CCTGTCTCCT 000240 000241 CCCATAGTTA GGTGCCAAGC ACTGTGGATT CTGCCTCTCA GTGTCCAGAC ACCCATTTTC CTTCCCACTG TTCCTTCCCC 000320 000321 ATGGAGAAGC CTGTGGCTGG CTGACAGCAG AGAGAGATGC TCAACTTGGA GAAGGTGTTA CCTGGGCCAG GTGGGGAAGG 000400 000401 TTTGTTTGCA GAGCAAAGAA GTGAAGccta ttcaacgtga aaaagatgag gatgaagacc tttattatga tccacttcca 000480 000481 agtaatgaac acactggaga aagtcagaca gtcaaaacaa tgtcccagac tccgtgaagt tcctgggtag agaaggagac 000560 000561 agacatatac catacctaat aatTGGATGT CCGAGAGAAT GAGAGAATGG CAGAAAGAAC TTTAGagcat gggtatgatg 000640 000641 gctagagctt gagcagccat tgtggacatc agatgaactt gaaagtgaaa actatgagct gaatacgaca aagcaaacag 000720 000721 atagaaaact ggattcatta tgac |
Predicted Small Protein
Name | NONHSAT075397_smProtein_116:250 |
Length | 45 |
Molecular weight | 4425.9469 |
Aromaticity | 0.0 |
Instability index | 73.9909090909 |
Isoelectric point | 4.51568603516 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0288818229995 |
Amino acid sequence | MASLLLECSDVISAHCNPCLLDSSNSPASPSQVAGITVPVSSHS |
Secondary structure | LLHHHLLLLLHHHLLLLLLLLLLLLLLLLLLLEEEEEEEELLLL |
PRMN | - |
PiMo | - |