NONHSAT075436
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075436 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1184 nt |
Genomic location |
chr2-:171784208..171785364 |
Exon number |
1 |
Exons |
171784208..171785364 |
Genome context |
|
Sequence |
000001 GTGTGTAGGT ATTTTCCCAA ACTGTACAGC TGAGGGGAAT AGTGGCCTCC TGTGGGCTGC CTAGCATCTG CTCAGCTAAA 000080
000081 TTTTATAAAA GGAAACGCTC CCTTTATAAA ACAGTAGTCT CACAGAGTCA CCTACCAACT TCTTTTTTGG TTTGGGTTTG 000160 000161 TTTTTTTTTC TTCCTCCCTA ATTGTGAGAA TAAGATTAGA GGATTGGTCA TAATCAGAGC GATGCCAGCG TGGGAAGCAC 000240 000241 GGTTGGATTT CCCTGGCATT CCACCACCTG CTGCTGCTCG GTTCCCCGTC CTACCTCCTT CAGGTAGCCA GGTCGTATTC 000320 000321 ATGCTTATTC CGTTGTCGTA TTCCGTTGCT GCTTTTGCCC CTTACGTGTA CTCCCTCTGA AACCCCTAGT TGCTTTGTGG 000400 000401 TCAGTTGGAC TGATGTTGCG TCAACCAGGT ATTATGTGGA TTCCTATGTG ATGCAATGTA AAGTACGTAC TATCGCCCAT 000480 000481 GAAGTATTCT AGCCCAAGGT GGTTAACTTG CCTCTATGGC ATCTTGAGTT TGATGTTTAC AGGAAGTAAG GGGAATTGAG 000560 000561 GAGCAAGTAA AATGACACCA CAGGGAACCA GGCAAATACA GGAAGTGGGC CTTCCTTCAG GACAGCTGGC CAGTTCTCTT 000640 000641 TGTCGAGTCA GAGTCCTATG AAAGGGCCTA TGCCAGATTA AAAGGAACCC GAAGAATATA ACCAAGAGAC ACATTGCAAG 000720 000721 GGCTTGAGTT GGGGGCCAAC TTGGAGAAAT AAGCGTAAAG GACATTTTTG GTTCATTTGG AGAAATTTGA ATATGTACTG 000800 000801 AGTATTAGAA GAGTAGTTAT TCACATGGAA ACGTGGAAAT TATTGTCTTT TTTAAAAGCT GGTTACAAGA CGGGATGTGT 000880 000881 CTGTAGACAA AATGAAAAAC ATGTCCTCAA AATACAGATT AATATGTATG TATGCATATG AAGATGTGGG AGGAGAATAT 000960 000961 GAACCAAGGG TTACAGTGGT GATCTCTGGG TGGTGACAGA GATATTTTAT TTTTTGTTTT GGCTGGTTCC ATATTCTATG 001040 001041 ATGCTCATGA AGTGCTTTTG TAATAAGAAA ATATTATTTA AAATTTAAAA ATAATTTTCT TTGCTATCGG TAAGTGAATA 001120 001121 GCAGATTTTT AGGAGGCCTA ATAAATCCAT AAATCCAAAA AAAAAAAAAA AAAAAAAAAA AAAA |
Predicted Small Protein
Name | NONHSAT075436_smProtein_221:379 |
Length | 53 |
Molecular weight | 5606.5565 |
Aromaticity | 0.153846153846 |
Instability index | 55.6134615385 |
Isoelectric point | 5.82281494141 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.00911696009734 |
Amino acid sequence | MPAWEARLDFPGIPPPAAARFPVLPPSGSQVVFMLIPLSYSVAAFAPYVYSL |
Secondary structure | LLLHHHLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEELLLLHHHLLHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToooooo |