NONHSAT075489

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT075489

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1897 nt

Genomic location

chr2+:172950995..172954040

Exon number

2

Exons

172950995..172951581,172952731..172954040

Genome context

Sequence
000001 GCGGCTCGGT GTGCAGAGCA CACAATGCCC CGCTGGAAAA CAGAAACCCA CATGTGCACG TATTAGTCTC GGTAATTATT 000080
000081 TATTGCGTAG CGCTATAAAC AATGTATGCA ATTAAGGGTA ATTAAACCTC AACTACCGCC TGCAAAAATA GCAAACTTTC 000160
000161 CCTGCAAAGG CAGGAGCTGA GCTCCTGGGA ACGGCTCTAT CCCTCCTGCA GCGTCCCGGG ACAGGCCCTC GGATTTTGGG 000240
000241 GGACCCTTCC CTGGCTTTCA GAGTTTCTTG AACGTTCTCT CCCTGGTGCT GCCTCCGCCA CCCTTCGGTA GCCACTCGCT 000320
000321 CTCGGCTGTT CGCACTAAAG GCGGCCCCTC GTATTAACAA CGGGCCCTAC TTCTGCTGTC CCTCCAGGGG CGGACTCGGA 000400
000401 GAAGAGCACG GTGGTGGAAG GCGGTGAAGT GCGCTTCAAT GGCAAGGGAA AAAAGATCCG TAAACCCAGG ACGATTTATT 000480
000481 CCAGTTTGCA GTTGCAGGCT TTGAACCGGA GGTTCCAGCA AACTCAGTAC CTAGCTCTGC CGGAGAGGGC GGAGCTCGCG 000560
000561 GCCTCTTTGG GACTCACACA GACTCAGGTC AAGATCTGGT TCCAAAACAA GCGATCCAAG TTCAAGAAGC TGATGAAGCA 000640
000641 GGGTGGGGCG GCTCTGGAGG GTAGTGCGTT GGCCAACGGT CGGGCCCTGT CTGCTGGCTC CCCACCCGTG CCGCCCGGCT 000720
000721 GGAACCCTAA CTCTTCATCC GGGAAGGGCT CAGGAGGAAA CGCGGGCTCC TATATCCCCA GCTACACATC GTGGTACCCT 000800
000801 TCAGCGCACC AAGAAGCTAT GCAGCAACCC CAACTTATGT GAGGTTGCCC GCCCGTCTCC TTCTTGTCTC CCCGGCCCAG 000880
000881 GTCCCTCCCG CCTCCAGGTC CATCCATCCC GTCCGGAAAA GAAGGACCCA GAGGGAAGAA GGAACAGTGG AGGCGGGACG 000960
000961 CCCTCCATCT CCTCGGAGCC CCGCGAGGTC CGGCCCAGCA ACTTCCCGGC ATCCGCGCTC TAGCCTGAAC CCTGGCCTGG 001040
001041 GCCGAGCAGT GGCAGCAGAG AGTGGCCTCG GAGGGAAGCC ACTGCCACCT GAGACAGCCC AAGCAGCAAG ATAAACCCGC 001120
001121 TCCACCCGAC CCGCCGACCT TCAGCTTTGT GGGACTATCA GGAAAAAACA AAACAAAAAC AAAATGTAGA AAAAGCAAAA 001200
001201 GCTCTTTTCT GTCCTGTCAG TCTCCTGTCT CCTTTTGCTC TGTCTGTGCG CTGGTAAAGT CCAGGTCCTC ATCCGTCCGC 001280
001281 TGTCCTCATT CTGCGGCCTC AGCAAAAAGC CACAAGGTCT GAGCGGCCCG GGTCCTGCCG GGCTGACCAT CTCCGGATCC 001360
001361 TGGGACACTC TGCCTGACCA TCTGTGTAGC TGGTGTGGGA ATCTGGGGGC ATTGGAGGGA GGGGGTTTTA TTTATTGAGA 001440
001441 AATGGACTTC GCCTGAGGCT GTTTGCCAAT TCAGGGTTCT GCTGGGCGCA AGGAACGCAC TGTTCAAACG CACTGTTTAC 001520
001521 TTTAAGCGCA CGGGGAGAAA CGAATAAGGA GGACGTGGTG ATTTTTAATT TATACAGTAA CTTTTGTACT TCTCTGGTAT 001600
001601 GGAGAGTTTG GAGCCGAATG ATTTGCATTT TTTACATGTC CGACattatt taataaataa tttttaaaaG AAAAGAACGA 001680
001681 TAAATGAAGC CAACATGATT TTCTCATTTC GGGAGGAACT CTGTTGCTTC GCCTGGACAA GAAGGAAAAT GCTGATTTCC 001760
001761 TCCTTGGGTA GAAAGAGGGA GCGAGGGCAA ATGGGGAGTA GAGAGAAAAC AGGCGAGAAC AAGCACTCTA ATTCCAGTGG 001840
001841 GCTTTAAAAT AAGACAAAAT CAGCTTTACA ACAATCCCTA GAGGCTCGAC CACAGAA
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Predicted Small Protein

Name NONHSAT075489_smProtein_632:841
Length 70
Molecular weight 6946.5569
Aromaticity 0.0724637681159
Instability index 50.5985507246
Isoelectric point 8.16094970703
Runs 7
Runs residual 0.0378820490745
Runs probability 0.0437706614177
Amino acid sequence MKQGGAALEGSALANGRALSAGSPPVPPGWNPNSSSGKGSGGNAGSYIPSYTSWYPSAHQ
EAMQQPQLM
Secondary structure LLLLHHHHHHHHHHLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHH
HHHLLLLLL
PRMN -
PiMo -