NONHSAT075489
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075489 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1897 nt |
Genomic location |
chr2+:172950995..172954040 |
Exon number |
2 |
Exons |
172950995..172951581,172952731..172954040 |
Genome context |
|
Sequence |
000001 GCGGCTCGGT GTGCAGAGCA CACAATGCCC CGCTGGAAAA CAGAAACCCA CATGTGCACG TATTAGTCTC GGTAATTATT 000080
000081 TATTGCGTAG CGCTATAAAC AATGTATGCA ATTAAGGGTA ATTAAACCTC AACTACCGCC TGCAAAAATA GCAAACTTTC 000160 000161 CCTGCAAAGG CAGGAGCTGA GCTCCTGGGA ACGGCTCTAT CCCTCCTGCA GCGTCCCGGG ACAGGCCCTC GGATTTTGGG 000240 000241 GGACCCTTCC CTGGCTTTCA GAGTTTCTTG AACGTTCTCT CCCTGGTGCT GCCTCCGCCA CCCTTCGGTA GCCACTCGCT 000320 000321 CTCGGCTGTT CGCACTAAAG GCGGCCCCTC GTATTAACAA CGGGCCCTAC TTCTGCTGTC CCTCCAGGGG CGGACTCGGA 000400 000401 GAAGAGCACG GTGGTGGAAG GCGGTGAAGT GCGCTTCAAT GGCAAGGGAA AAAAGATCCG TAAACCCAGG ACGATTTATT 000480 000481 CCAGTTTGCA GTTGCAGGCT TTGAACCGGA GGTTCCAGCA AACTCAGTAC CTAGCTCTGC CGGAGAGGGC GGAGCTCGCG 000560 000561 GCCTCTTTGG GACTCACACA GACTCAGGTC AAGATCTGGT TCCAAAACAA GCGATCCAAG TTCAAGAAGC TGATGAAGCA 000640 000641 GGGTGGGGCG GCTCTGGAGG GTAGTGCGTT GGCCAACGGT CGGGCCCTGT CTGCTGGCTC CCCACCCGTG CCGCCCGGCT 000720 000721 GGAACCCTAA CTCTTCATCC GGGAAGGGCT CAGGAGGAAA CGCGGGCTCC TATATCCCCA GCTACACATC GTGGTACCCT 000800 000801 TCAGCGCACC AAGAAGCTAT GCAGCAACCC CAACTTATGT GAGGTTGCCC GCCCGTCTCC TTCTTGTCTC CCCGGCCCAG 000880 000881 GTCCCTCCCG CCTCCAGGTC CATCCATCCC GTCCGGAAAA GAAGGACCCA GAGGGAAGAA GGAACAGTGG AGGCGGGACG 000960 000961 CCCTCCATCT CCTCGGAGCC CCGCGAGGTC CGGCCCAGCA ACTTCCCGGC ATCCGCGCTC TAGCCTGAAC CCTGGCCTGG 001040 001041 GCCGAGCAGT GGCAGCAGAG AGTGGCCTCG GAGGGAAGCC ACTGCCACCT GAGACAGCCC AAGCAGCAAG ATAAACCCGC 001120 001121 TCCACCCGAC CCGCCGACCT TCAGCTTTGT GGGACTATCA GGAAAAAACA AAACAAAAAC AAAATGTAGA AAAAGCAAAA 001200 001201 GCTCTTTTCT GTCCTGTCAG TCTCCTGTCT CCTTTTGCTC TGTCTGTGCG CTGGTAAAGT CCAGGTCCTC ATCCGTCCGC 001280 001281 TGTCCTCATT CTGCGGCCTC AGCAAAAAGC CACAAGGTCT GAGCGGCCCG GGTCCTGCCG GGCTGACCAT CTCCGGATCC 001360 001361 TGGGACACTC TGCCTGACCA TCTGTGTAGC TGGTGTGGGA ATCTGGGGGC ATTGGAGGGA GGGGGTTTTA TTTATTGAGA 001440 001441 AATGGACTTC GCCTGAGGCT GTTTGCCAAT TCAGGGTTCT GCTGGGCGCA AGGAACGCAC TGTTCAAACG CACTGTTTAC 001520 001521 TTTAAGCGCA CGGGGAGAAA CGAATAAGGA GGACGTGGTG ATTTTTAATT TATACAGTAA CTTTTGTACT TCTCTGGTAT 001600 001601 GGAGAGTTTG GAGCCGAATG ATTTGCATTT TTTACATGTC CGACattatt taataaataa tttttaaaaG AAAAGAACGA 001680 001681 TAAATGAAGC CAACATGATT TTCTCATTTC GGGAGGAACT CTGTTGCTTC GCCTGGACAA GAAGGAAAAT GCTGATTTCC 001760 001761 TCCTTGGGTA GAAAGAGGGA GCGAGGGCAA ATGGGGAGTA GAGAGAAAAC AGGCGAGAAC AAGCACTCTA ATTCCAGTGG 001840 001841 GCTTTAAAAT AAGACAAAAT CAGCTTTACA ACAATCCCTA GAGGCTCGAC CACAGAA |
Predicted Small Protein
Name | NONHSAT075489_smProtein_632:841 |
Length | 70 |
Molecular weight | 6946.5569 |
Aromaticity | 0.0724637681159 |
Instability index | 50.5985507246 |
Isoelectric point | 8.16094970703 |
Runs | 7 |
Runs residual | 0.0378820490745 |
Runs probability | 0.0437706614177 |
Amino acid sequence | MKQGGAALEGSALANGRALSAGSPPVPPGWNPNSSSGKGSGGNAGSYIPSYTSWYPSAHQ EAMQQPQLM |
Secondary structure | LLLLHHHHHHHHHHLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHH HHHLLLLLL |
PRMN | - |
PiMo | - |