NONHSAT075549

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT075549

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1935 nt

Genomic location

chr2+:174890008..174891891

Exon number

1

Exons

174890008..174891891

Genome context

Sequence
000001 CTCTGGTCTC CTGACTCTGG CAGGGGGAAC ATTTGCACTG TTCTTGTTCC TTACCCCAGG AGCTGGCCTA TTGCACAACC 000080
000081 TCAGGAAACA GCCCCTATGC AATCCTGGCC CACAGAGCGG ACATGTTCTG GTTTTTATTC AGCAGCTTTT TTATGAAGTG 000160
000161 TGTTTTCCTT TCCCATCATG TCATCTGGAA GCAATTCCTC CCAACAGCTG GATTTGCTTT CACAATTGGT AAACACCGCG 000240
000241 AATGGAAGGC CGGGGACGAT GCGGAGCTCC CCGGAGGAGC CTTGTCCCCA CCCGCTTGGC TCGCGTTCTG AAGCTTATCG 000320
000321 CGGGTGCCTG CACAAGCCTC ATCAAAATCG AGGGCGTCCT CCAGCAGGCG ACCCACATTG CATTCCCCGC TTAAGAGGGT 000400
000401 CAACGTGTTC TTCGGGGGAG AAATTTTCTG AATGCTTTGC AGATAAAATT GATCAGATGC AGGCCAGATT GCCAGCTGCC 000480
000481 GGGGCCGCGT GCGCCTGTGG AGGCCCCACC AGCGCGGGGC ACCAGCGCCT CGGGGTCCGG GGGAGGCCTC TCTCTGCACC 000560
000561 GCCGCCACCA AAGCCAGTAA GAGAGGGCAA AACCCCAAAG AGCACTGACT GGGCCGTCAA GGAAGATGAA TGTCTCCCCA 000640
000641 AAAGTGCTCC TCGGGGACAA GTTTCCACGC AGATGCAACC GGGAACGCCG GCCAGGCTCC GGAAGGCGAG GCCCCAGAGC 000720
000721 GCAGCGGCCT CCAAGCGCGG GCTCAGCCTG TCGCCTCCGC AGCCAGGGCC CAGGAGGCCG CTCTTCCGGG GTCACCAACA 000800
000801 CGGCTCGTTC TGAGCCTAGA GGCCCAGGGC ACAGTGTGAG CCGGAATACG GTGTAGGGGA CACAGCTCAG GCCCCAGGCA 000880
000881 CTCCCTCCTG TCGCAGAAGA AATGCTGTTC TTTGATCAAT GTTTCTAATG TGGGGAAACC AGCCGAGCAC GTGGCTGAAC 000960
000961 TCTCGGAGGG AGCACGGGGT GCTGGTGAGC CCCCGCTCTG ATGCACAGAG ACGCTGCTGG CCAGGCTGGG GTGGGTTGCA 001040
001041 AAGGCTTCCT TCCATGCACC ACCAACCCTG TGGGCAGCCA GGGCCTAGCT CTCATGAAGG GGCCTTCCCA GGGCAAAGTG 001120
001121 GGCCTCTGAC TGCAACGTTC TCTGGGCAGA GATAGGCATC CTTCCCACTG CACAAACAAA AGGAGACCGT CAAGGGGAGA 001200
001201 GGCTCACCAG AGGACCCTGG TGAGGGCGAC GCCCAACTCC TCAGCACAAG GCTGTGCTTC TTCCATGGAG CCCGTTTGCC 001280
001281 TGGGCCCAGC GCGTGCGGAG TGCGTTCCTT CTCGCTCCCT CTGTCCTGTG GGCCCTCCTC TCTCTCCCTC CAGCCTGGTG 001360
001361 GAAGCTTTAT TCTCGTCGGG GGCCAGAGGA CAGAAACTAC ATCATATATT TTCCCGTGCG TCATGTTATC TTGCCTGGAA 001440
001441 TTTTGAAAAT CTGTGAGTTT CTGGTTTTTC CATGGCAAGG CTCATTCCTC CAGACCTTAG TCACTCTGCT CTGGCTGCCT 001520
001521 GGACTGCTAG AGAGGGGCCT CAGGGCGCAC CTGGAGAAAT TCACTGGGGC CCAGGTCAGA GGGATGGGTG GGTGAGAGCA 001600
001601 ACCCCTTCCT TAATAGTTCA AAATGGCCCT CTGGCTTAAA GAGACCGAAG CCCCGTAACA ACCAAATGCA ATGTGTGGGC 001680
001681 CGTGTTTGGA TCCTGATTCA AACAAACCAA CTGGAAGAGG AGATTTGGGG ATAATCAGGA AGATTTGAAT TGGGGCTGGG 001760
001761 TAGCCGAAAA TAGCAAAGAA TTATTGTTAA TTTTGCTATG TGCGATAATG GGGGGGTAGT TATAGAAGAA AACCTGCTTT 001840
001841 TTTTTTAAAT GGGGTATATT AAAGTATTTA AGGGGGGAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 001920
001921 AAAAAAAAAA AAAAA
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Predicted Small Protein

Name NONHSAT075549_smProtein_629:838
Length 70
Molecular weight 6874.4735
Aromaticity 0.0144927536232
Instability index 60.1753623188
Isoelectric point 5.62518310547
Runs 7
Runs residual 0.0378820490745
Runs probability 0.0267746738335
Amino acid sequence MSPQKCSSGTSFHADATGNAGQAPEGEAPERSGLQARAQPVASAARAQEAALPGSPTRLV
LSLEAQGTV
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELHHHHHHHHHHHHLLLLLLEEE
EEEEELLLL
PRMN -
PiMo -