NONHSAT075549
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT075549 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1935 nt |
Genomic location |
chr2+:174890008..174891891 |
Exon number |
1 |
Exons |
174890008..174891891 |
Genome context |
|
Sequence |
000001 CTCTGGTCTC CTGACTCTGG CAGGGGGAAC ATTTGCACTG TTCTTGTTCC TTACCCCAGG AGCTGGCCTA TTGCACAACC 000080
000081 TCAGGAAACA GCCCCTATGC AATCCTGGCC CACAGAGCGG ACATGTTCTG GTTTTTATTC AGCAGCTTTT TTATGAAGTG 000160 000161 TGTTTTCCTT TCCCATCATG TCATCTGGAA GCAATTCCTC CCAACAGCTG GATTTGCTTT CACAATTGGT AAACACCGCG 000240 000241 AATGGAAGGC CGGGGACGAT GCGGAGCTCC CCGGAGGAGC CTTGTCCCCA CCCGCTTGGC TCGCGTTCTG AAGCTTATCG 000320 000321 CGGGTGCCTG CACAAGCCTC ATCAAAATCG AGGGCGTCCT CCAGCAGGCG ACCCACATTG CATTCCCCGC TTAAGAGGGT 000400 000401 CAACGTGTTC TTCGGGGGAG AAATTTTCTG AATGCTTTGC AGATAAAATT GATCAGATGC AGGCCAGATT GCCAGCTGCC 000480 000481 GGGGCCGCGT GCGCCTGTGG AGGCCCCACC AGCGCGGGGC ACCAGCGCCT CGGGGTCCGG GGGAGGCCTC TCTCTGCACC 000560 000561 GCCGCCACCA AAGCCAGTAA GAGAGGGCAA AACCCCAAAG AGCACTGACT GGGCCGTCAA GGAAGATGAA TGTCTCCCCA 000640 000641 AAAGTGCTCC TCGGGGACAA GTTTCCACGC AGATGCAACC GGGAACGCCG GCCAGGCTCC GGAAGGCGAG GCCCCAGAGC 000720 000721 GCAGCGGCCT CCAAGCGCGG GCTCAGCCTG TCGCCTCCGC AGCCAGGGCC CAGGAGGCCG CTCTTCCGGG GTCACCAACA 000800 000801 CGGCTCGTTC TGAGCCTAGA GGCCCAGGGC ACAGTGTGAG CCGGAATACG GTGTAGGGGA CACAGCTCAG GCCCCAGGCA 000880 000881 CTCCCTCCTG TCGCAGAAGA AATGCTGTTC TTTGATCAAT GTTTCTAATG TGGGGAAACC AGCCGAGCAC GTGGCTGAAC 000960 000961 TCTCGGAGGG AGCACGGGGT GCTGGTGAGC CCCCGCTCTG ATGCACAGAG ACGCTGCTGG CCAGGCTGGG GTGGGTTGCA 001040 001041 AAGGCTTCCT TCCATGCACC ACCAACCCTG TGGGCAGCCA GGGCCTAGCT CTCATGAAGG GGCCTTCCCA GGGCAAAGTG 001120 001121 GGCCTCTGAC TGCAACGTTC TCTGGGCAGA GATAGGCATC CTTCCCACTG CACAAACAAA AGGAGACCGT CAAGGGGAGA 001200 001201 GGCTCACCAG AGGACCCTGG TGAGGGCGAC GCCCAACTCC TCAGCACAAG GCTGTGCTTC TTCCATGGAG CCCGTTTGCC 001280 001281 TGGGCCCAGC GCGTGCGGAG TGCGTTCCTT CTCGCTCCCT CTGTCCTGTG GGCCCTCCTC TCTCTCCCTC CAGCCTGGTG 001360 001361 GAAGCTTTAT TCTCGTCGGG GGCCAGAGGA CAGAAACTAC ATCATATATT TTCCCGTGCG TCATGTTATC TTGCCTGGAA 001440 001441 TTTTGAAAAT CTGTGAGTTT CTGGTTTTTC CATGGCAAGG CTCATTCCTC CAGACCTTAG TCACTCTGCT CTGGCTGCCT 001520 001521 GGACTGCTAG AGAGGGGCCT CAGGGCGCAC CTGGAGAAAT TCACTGGGGC CCAGGTCAGA GGGATGGGTG GGTGAGAGCA 001600 001601 ACCCCTTCCT TAATAGTTCA AAATGGCCCT CTGGCTTAAA GAGACCGAAG CCCCGTAACA ACCAAATGCA ATGTGTGGGC 001680 001681 CGTGTTTGGA TCCTGATTCA AACAAACCAA CTGGAAGAGG AGATTTGGGG ATAATCAGGA AGATTTGAAT TGGGGCTGGG 001760 001761 TAGCCGAAAA TAGCAAAGAA TTATTGTTAA TTTTGCTATG TGCGATAATG GGGGGGTAGT TATAGAAGAA AACCTGCTTT 001840 001841 TTTTTTAAAT GGGGTATATT AAAGTATTTA AGGGGGGAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 001920 001921 AAAAAAAAAA AAAAA |
Predicted Small Protein
Name | NONHSAT075549_smProtein_629:838 |
Length | 70 |
Molecular weight | 6874.4735 |
Aromaticity | 0.0144927536232 |
Instability index | 60.1753623188 |
Isoelectric point | 5.62518310547 |
Runs | 7 |
Runs residual | 0.0378820490745 |
Runs probability | 0.0267746738335 |
Amino acid sequence | MSPQKCSSGTSFHADATGNAGQAPEGEAPERSGLQARAQPVASAARAQEAALPGSPTRLV LSLEAQGTV |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELHHHHHHHHHHHHLLLLLLEEE EEEEELLLL |
PRMN | - |
PiMo | - |