NONHSAT075714
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075714 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1763 nt |
Genomic location |
chr2-:178151762..178203427 |
Exon number |
7 |
Exons |
178151762..178152562,178175692..178175763,178175961..178176056,178179524..178179766,178187813..178188124,178199121..178199257,178203326..178203427 |
Genome context |
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Sequence |
000001 GATGAATAAT CTGATATCAT GTGAAATGAG GAAATAAGAA GCTTTCTGCT GACTTCATTT TGACCCAGGG TCCAAAAGGT 000080
000081 GATGTAATCC TGTGGCAAGA AGATTCAAAA CTGTGGACTA TCTTGCAAAA AATACAAGAA GATATTGAAA GTTTTCATGA 000160 000161 GTGCCTACCA CCTAATCTCA AACACTATCA TTCATATGTG CCTCATTGAG CAAATCTTTA ATGAGGATCT ATATGCCAGC 000240 000241 AATATCTTTT GCTTGGGAGC AGAAACAGAA AGTACATGAT GGACTTCATT GAAGGATGGA GATTTGGAAG ACATGAATGG 000320 000321 ATGAAGAACC AAGTGCGTGA GGGCACCTAT CAGGATTATT GCTGAAATCC TTATGGAGTT AACTGGCTGA GAGGAAGGCA 000400 000401 AGCAAGCGAG GACTGATGGG CCCTTGGCAC TGTGAGAACA GTGGAGGAGG AGGGAGCAGG GTTCATAAGG AGGAGCACAA 000480 000481 ACAGAAAGTT CAGTGGCCCC AATAAAAATA ACACCAGAAT CTTCCAGATA CTTTCTCCAT AAGGCGAAAA GTTGTCTCTA 000560 000561 ACTCCACAAA TTTCAACATG CATACAAATC AAGAAGGGGT GGGGGTGTTA CATGCAAATT CTGCTTCAGT GGGTGTTGGA 000640 000641 GCCTGAGATT CTGGCTTTCT AACAAGCTCC CAGGTAAGTG CTGATGCTGC TGCTTTGAGG GCCACACACC TTGAGGAGTA 000720 000721 GGAAGAGTAC TCATACTGGA AGAGTATTCA GCACGGACTG GAATCCTGCA TACATATCTG AGCTCTGTGT TCTGTAGAGA 000800 000801 TGGGGTTTCA CCATGTTGCC CAGGCTGGTC TCAAACTCCT GAGCTCAGGC CATCTGCCCG CCTCGGCCTC CCAAAGTGCT 000880 000881 AGGATTACAG AAGGTGCCTG CTTCCCCTTC ACCTTCCACC ATGATTGTAA GTTTCCTGAG GCCTCCCCAG ACATGTGGAA 000960 000961 CTAACAGGTT TCTCTTATTG CCTGGATCCA AGAGCATCTC CTGGGTTCTT CCTGTTAGAA TACTGAATGT CCATGGAGAG 001040 001041 TTTAACATAA GGAAGAAGAG GCCTGTCTCC CAGCTGAAAC TGGTGCAGCA GATCATGCAA AGTAAAACCT CAGCAGCTGT 001120 001121 GATGAAGTAG AGCAGAGGGC CTGGGTGTCT GTCAGCTCCA AGCGGAAGAT TTCCCCAGCT TTCTAGGTAA CTGTGCTTCC 001200 001201 ACTGAGCAAG CCAGACACAG ACTTGAATGT CATCACAATC TGTGCCTGTG ACATCTTTCC CCAAGAATAG CACAAATTGA 001280 001281 ACTTTTACAT TCTTCATAAT ATGGAAGGAA AGGTATTGAC TGAGCCACTT CTTTATGCCT CAAGACATCT CATATGTATT 001360 001361 TATATGGATA CATACATGAA TGTATATATT CTGTCATAAT AACATATTCT ATTTTTCTTA TTATAGCACA GTGTTAGGAT 001440 001441 AGGCTACATA GGCTGCATTA AACCCTCAAA TAGAAGTTTA TATTATGCAT CAGAAGCCAG TGCAGGGACT CTCCTCAGCA 001520 001521 CAACATCTCT AAGTGGTGAC TTGGAGGTTC AGGCTCCTTT CATCTTAAAA TGCCATCATC TTCAGCATTT GGCCTCAACA 001600 001601 GTTGCCAGAG AGGGAGAAGA GAGTATGTAT AAGACCACAC TGCAGGATCT GTGTTAGGTC TGCAAGCACT GCTGTCACCT 001680 001681 CTGCCAAATC CCGTTAGCCA GAACCCAATC ATATGGCCCC ATCCTAACTG CAAGGGAAGC CTGGGAAAGG TCTTCTTGTA 001760 001761 TGC |
Predicted Small Protein
Name | NONHSAT075714_smProtein_920:1129 |
Length | 70 |
Molecular weight | 7818.3512 |
Aromaticity | 0.0579710144928 |
Instability index | 48.7927536232 |
Isoelectric point | 11.8541870117 |
Runs | 11 |
Runs residual | 0.0200889654183 |
Runs probability | 0.0313789725555 |
Amino acid sequence | MIVSFLRPPQTCGTNRFLLLPGSKSISWVLPVRILNVHGEFNIRKKRPVSQLKLVQQIMQ SKTSAAVMK |
Secondary structure | LEEEELLLLLLLLLLEEEELLLLLEEEEEEEEEEEEELLEEEEEELLLHHHHHHHHHHHH HHHHHHLLL |
PRMN | - |
PiMo | - |