NONHSAT076129
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076129 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1258 nt |
Genomic location |
chr2+:192557937..192561319 |
Exon number |
2 |
Exons |
192557937..192558142,192560268..192561319 |
Genome context |
|
Sequence |
000001 CTGTCATCCT TGACATTTGG GGCAGAAACT GCTGAAATGA AGGAGGACTT GCCATCAAAG AACTGGCTGA AAGGAGTTAG 000080
000081 CACACCACTC CTCTGCCCTG AACAGTTCTA AGCAAGAGGA GGAGCCTGTG GCAGGGCGTG ATATGAAGTC CTCAGAGATA 000160 000161 GAGTGCCAAG AGTAGAGGGA GTATCCTGGA ACTTCAGTGT TTGCAGgctg tatacaagca gggctgttag catctgctca 000240 000241 gcttctgatg aggcccagga agcttttggt cttggtggaa gagaagagga gccagcatat tacatgacga gaggaagcaa 000320 000321 gagagatacc aggctctttt aagcaaccag ttctcatgtg aacgcattgc tactgagaaa gtgccaaacc attcacgagg 000400 000401 gatccactac ctagacccaa acacctcccc ctaggccccg tctccaacag cggggatcat atttcaacat gagacttcga 000480 000481 ggagacaaat atccaaacca tatcgcccac gtttaggaat GTCTCTCCAT GGTAGATGAT TTGCAAATAG ACGGTGGTAT 000560 000561 ACCCATTCCA TGGAAGCAGG GAAATATGTT TGcacgtctt tggttagtcc tcttcttttc tactgacagt gggcttgtcc 000640 000641 atgtgtcctg catgatcaaa atgacaatag caaacttgat ggccacagaa gattgaaaag tgcttgggca ttgagcttgc 000720 000721 tctctcttga agtgcttgga gccctgagac tgccatgaga ccacataaat gatcactagc tagcctgctg gaggatgaga 000800 000801 ggtcacttga gaaaccttgg ctcacagcct gcttacacca gacacatgga tgagtctgtc ttagactatc cagctccagc 000880 000881 tgagttgcca gctgacttca gtcacatgag tgagaacaac agaaggacag cactgagctc tgccaaaatt gctgacctac 000960 000961 agaatcttga gctaatgaat gattgtagct ttatgccatt aagttctgag gcagtgtgct atacatagca aaagctaact 001040 001041 gatacaAAAC TAAAGATACA ATGGCACaaa catgaaaaga catgttcacc gaagcattgc ctataatagt taaagactgg 001120 001121 aaacgactca gatgtccacc aactcaggag tggttgaacc tactacagtg cattcacccc gtggaatact aagcagctcc 001200 001201 aacaggggta ggaaatttgt atactttcat aaaatgatct ttaggatata ttgttaag |
Predicted Small Protein
Name | NONHSAT076129_smProtein_794:1027 |
Length | 78 |
Molecular weight | 8617.5926 |
Aromaticity | 0.0649350649351 |
Instability index | 65.1064935065 |
Isoelectric point | 5.09674072266 |
Runs | 7 |
Runs residual | 0.0451722190853 |
Runs probability | 0.0205794029324 |
Amino acid sequence | MRGHLRNLGSQPAYTRHMDESVLDYPAPAELPADFSHMSENNRRTALSSAKIADLQNLEL MNDCSFMPLSSEAVCYT |
Secondary structure | LLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH HLLLLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |