NONHSAT076190
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076190 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
861 nt |
Genomic location |
chr2+:197504439..197522153 |
Exon number |
2 |
Exons |
197504439..197504502,197521357..197522153 |
Genome context |
|
Sequence |
000001 AGTTCCACGG AAACCCGCTC GCCTGCTGCA GTACGGAGCC TCAGGCGGAC AGATGGACTG TAAGAGGCTA TTTGGAAGCT 000080
000081 CCAGACTGTT TAGAAGACCT GGACAGCCAG AAAGTCATTA GTCCTATCCA AAATGAAGCA ATTTGTGCAG GAAAAACAGA 000160 000161 TATTTTATGG AAGAACTGTG AGTTTCTGGT AAATCGAATG TGCCGTCTTG AAAGCCTCAT GCAGTCCTTG AAGATGAACA 000240 000241 TCTTTCGGCT GCAAACTGAA AAGGATTTGA ATCCTCAGAA AACAGGTATA GAGATAAGAA TCATCAGAAA TGTGGTCCTG 000320 000321 TATAGGTGCT TGATTTTCTT TACTGACCTT CTTTCTGCTG CTTGATGCCC CTCCTGTGCG GTCTGGTAGC TTTTCTGAAA 000400 000401 GATCGACTGA ATGCAATACA GGAAGAGCAT TCTAAGGACC TGAAGCTGTT GCATCTCGAA GTTATGAATT TGCGCCAGCA 000480 000481 ACTGAGAGCT GTAAAAGAGG AAGAAGACAA GGCACAAGAT GAGGTGCAAA GGTTGACTGC CACTCTGAAG ATTGCCTCGC 000560 000561 AGACAAAGGT TTGAGTCTAA GAGTTCTGAA GTATAAACAC ACTGTTATGT GTTAGCTGGA GGAGGTAACA GACCTATGAC 000640 000641 GCGACTTTTA AAAATAGGTG ATGTTGATAT GAGGATTCTT GGCATTTGAC ATTTGGCATG TTGATTTGAG GATTCTTGGC 000720 000721 CTATGACATT TGCACTGATA ACCTAAACCA CTGTGTGCTA TCTGTGATTG ATTATTTGTA CAACCCTTAC CCCATACAAG 000800 000801 TGATGGTGTG GGTCCAGAGG TATGAGATAG AGCCTGTGCT CTTCAGGAAC TCATATGCTA G |
Predicted Small Protein
Name | NONHSAT076190_smProtein_197:364 |
Length | 56 |
Molecular weight | 6488.7332 |
Aromaticity | 0.0727272727273 |
Instability index | 55.7927272727 |
Isoelectric point | 9.29888916016 |
Runs | 6 |
Runs residual | 0.0424242424242 |
Runs probability | 0.0228758169935 |
Amino acid sequence | MCRLESLMQSLKMNIFRLQTEKDLNPQKTGIEIRIIRNVVLYRCLIFFTDLLSAA |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHLLLLLLLLEEEEEEHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooo |