NONHSAT076391
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076391 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2911 nt |
Genomic location |
chr2+:202098188..202107648 |
Exon number |
3 |
Exons |
202098188..202098345,202098739..202098835,202104993..202107648 |
Genome context |
|
Sequence |
000001 GTTTCACCTT GTGTCTGAGC TGGTCTGAAG GCTGGTTGTT CAGACTGAGC TTCCTGCCTG CCTGTACCCC GCCAACAGCT 000080
000081 TCAGAAGAAG GTGACTGGTG GCTGCCTGAG GAATACCAGT GGGCaagaga attagcattt ctggagcatc tgctgtctGA 000160 000161 GCAGCCCCTG GGTGCGTCCA CTTTCTGGGC ACGTGAGGTT GGGCCTTGGC CGCCTGAGCC CTTGAGTTGG TCACTTGAAC 000240 000241 CTTGGGAATA TTGAGAGAAA CATTAGAATC ATTGCCCTTT AGAAGAGCAG AACTATGATG CCTCCTGTCa gggatggaac 000320 000321 gaggcattcc atgcagatga caacccaaag agagcaagag tggctctatt tatatcagac aaaatcgact ttaagtcaaa 000400 000401 aactgtcaca agagacatta aagtatatta tataatgaaa aaagcatcaa tccaccatga agatataaca attataaata 000480 000481 tatgcactca atatcagagc acctaaatat atgaaacaaa caatgacaga actgaaggga gaaatagcca gccatacaaa 000560 000561 aatagtagga gacttcaaca ctgtacttta aataatggat agaacattca gacagaagat taataaggaa acaggggact 000640 000641 taaacaacat tatagaccaa atggaccgaa cagaaataca cagaacgttc caccctacag cagtagaaca cacattatcc 000720 000721 tcaaatgcac atggaacttt ctccaaggta gatcacaagt tgggtcacaa aacaagtctt tgcaaattta agagactgaa 000800 000801 atcataccat gtatcttttc tgaccatgat ggaatgaaac taaaaatcaa tggcagaagg aaaaatagaa agttcacaaa 000880 000881 tatgtggaaa ttaaacaaca cactcttgaa caacaattag gccataaaaa taaaaaaaga aattaggaaa tatcttgaga 000960 000961 taaatgaaaa gaaaagcaca acatacccaa acttacagga taaaagcagt actaagcaaa gaagtactaa gaggtacttt 001040 001041 attgcaatac acatctgcag tgaaaaagaa gaaagatctc aagtaaatag tctaacttcg tgcctcaagg agaggagaag 001120 001121 aagatgaaga agaagaggaa ctaagcctaa aattagtgaa ggaaataaca aagattagag taggaaccaa gaaaatacag 001200 001201 aatagaaaag caatagaaaa aaaatcaaca aattttttga aaagaataac aaaagaattg gttttttgaa aagataaaca 001280 001281 aaatcaacaa atccctagtt aggctaagta agaaagagag aagactcaaa taaacaatat cagaaataaa agaggagaca 001360 001361 ttacaactga tgccacagaa ataaaaacat gaggctataa tgaacaattc tattccaaca aactggataa tctagaagaa 001440 001441 atgaataaat tcacaaaacc ttccaatcta cgatgactga atcatgaaga aatacaaagt ctgaacagac ttataactaa 001520 001521 tgtggaggtt tagtcaataa tcaaaaatgt tccccaaacg aagaagtcca ggaccagatg gcttcacagg tgaattcttc 001600 001601 caaacatctc aagaagaatt aatgccagtt cttcttaaac tatttttaaa aattgaagaa gagggcacac ttccaaattt 001680 001681 attttatgtg gccaacatta tcccgatacc aaagccaaac aaagacacca caagaaatga aaactgcagg tcaatatctc 001760 001761 tgatgaatat acatataaaa actcataaca aaatactagc aaatcaaatt caacagtaca tttaaatgat cgtacatcct 001840 001841 gactgagtgg catttatccc taggatacaa gtatggatca acatacaaaa ataaatcagt gcgaaatggc ctattaacag 001920 001921 ggcaaagata taaagataac atgatcatct caatagatgc agagaaagca tttgacaaaa ttcaataccc tttcgtgatt 002000 002001 aaacaatttt tcaacaaact ggaaatagag tctcaacatc atcaagacca tatataagaa AAttttcact gttgagtatt 002080 002081 atattagatg tgagcttttc atatatggga ttcataatat gttTCaaata tattacaaag ctatagtaat tgaaacagca 002160 002161 tgggaatagc ataaagacaa acacataggc catcagaaga gaagagagag ctcagaaata aatccatgca tatacagtgc 002240 002241 cttagtccat tcagcctgct aaaacaaaat accatagact ggtggcttat aaaacacaga aatttatttt tcacagttct 002320 002321 ggaggctagg aaattcaaga tcaagtagct agcagatttg ctatctagtg agggcctgct tcttggttca taaatggcca 002400 002401 tcttctccat gtgtcctcat ggaattaggg tgatggagcg ctctgggatt tcttttataa ggcactagtc ccattcataa 002480 002481 gtgctctacc ttcatgacct aatcacctcc caaaggtccc atctccaaat accaacacat aggggattag gtttcaacat 002560 002561 atgaatttta ggggaaacaa acatcagtct attgcaTata ctacctaaag caatctacaa atttggtgtg atctctatta 002640 002641 acatcccaat ggattttttt tttacagaaa aaaacctctg aagtataaaa aggaccacaa atagctaaat cagttttgag 002720 002721 gaagaacaaa gctagaagca ccatacttcc tgatttctaa atatattata ctcccatggt catagcagca ctatttacag 002800 002801 tagccaagat gtgcaaacaa cctaaatatc taggatgggg aaagaaaatg tggtagtcac ataaaatgga atattatttg 002880 002881 ccttataaag gagggaaatt ctataatata a |
Predicted Small Protein
Name | NONHSAT076391_smProtein_2225:2347 |
Length | 41 |
Molecular weight | 4944.9082 |
Aromaticity | 0.15 |
Instability index | 51.495 |
Isoelectric point | 10.1874389648 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.019153607389 |
Amino acid sequence | MHIQCLSPFSLLKQNTIDWWLIKHRNLFFTVLEARKFKIK |
Secondary structure | LLEEELLLLHHHHHLHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |