NONHSAT076591

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT076591

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3373 nt

Genomic location

chr2-:208084575..208125307

Exon number

10

Exons

208084575..208084677,208095248..208095339,208096156..208096637,208100023..208100334,208102910..208103461,208104585..208105062,208110117..208110611,208111575..208111980,208124847..208124997,208125004..208125307

Genome context

Sequence
000001 GATAGTTAGG ACTTACCTGA GCAGGAATAA GTTTTCAATG GTACAGGCAG ATGCTTTGGG AATCAGGAAG TGACCTGCTC 000080
000081 CTCCTTGAAA TGACTCTGGG CTGGGGCAAT GGTGACACTG CCACCTCATG GGATCTGGGG TTACCTGGTG GAGGAAAGAC 000160
000161 GCAGGATGAA GAGAACCAGG TATAACCCTG CCACTTGGAG TTTTTCCTAC AACTTGGGCT GGTGAAATGC TGAATCTCAG 000240
000241 TTTATGTTCA AAATAAATGA AACCTCATTC TATTACCAAA ATAAACTGCT CACATGTGAT GTTGAGACAG CCAGACAGAA 000320
000321 GCTGCCTTCA TACCAAAACA AGTGAATCAG GTGGTAGGAA TAAATGAACA AAGGGCAAGG CATTGTCACT GCCCCTTTCC 000400
000401 TTCAGCAGTA GAAAGACTGA CTAGAAAATT CATACGTAAA GAAAAAGACC TTTTTACTAT AAGTCAGACA TGGTTCAAGG 000480
000481 CTTTGTTACT AGGGTTTCTT TTGATCCTCA AGAAATTCCT TAAGGTAGGT ATTGCCCCCA TTTTAAACAA GGAAATTGAG 000560
000561 GCTCTGAGAG ATTAATAAGG AGACTGATCC AATAGCTCAT AAGCTGTTGA ACTGAAGTTG TACCTGATCT CCGTATACTT 000640
000641 TCTCCTATGA CACAAGCTGG GGGTGACAAG CACATAAGAT GATACATTCA ATGCTTTAGA AGTAAGAGTG TAAGCAAGTT 000720
000721 ACTGGAAGTA CTGAAAACAA TGTTATTTAG TTCTGGATCA ACTAGGGGAG ATACCCTTTT AGACTTAATC TTCCTGTAAC 000800
000801 AGGAAAAATT AATTAAAGAT TGAAGATTTC CACAGTAGAT GGCATGTTCA GAGCGGGTGA TGACAATGGA AAAGATCCTT 000880
000881 TATGTACCCA GCAGGAACAC CAGGGGAAGC TCTACCTCTT GATTAGATGT AAAGATGGCA GGACAGATTA ACACCCAAAG 000960
000961 ACACATTTCA ATGGGAAGCT GTGTTCACTT TGGGATCCTA GAGCAGGTTT CCCAGGCCAC AGACTGCAGT GGAGATTTGC 001040
001041 TTACAGGTGA CTGGGGGCAG GGAGTTCTCT GGGGAACAAT ACCTGTTGGG GAGTGAAGGC AGCAGGACTA GGCAGAGGGG 001120
001121 AAAGTAAACT GCGATGCAGC TGCAGCAGAG GCCTCAGCAC CCCACCAGGA GCTGCAGAGC TGGGGTGGTT TTCCAAGAGA 001200
001201 TCCTGAATTC AGGCAAGATG GGTACAACCT TTGTACCACA CTATGGACTA ATCACTTGGA ATGTATGCTG CCCCCAGGGT 001280
001281 GGGGGCACAT CCTAGAGCAA GGTGGCTCTT TTCAGCAATG CCTGGAGAGG GACTCAGCTG TGAGCCGTCA ACAGCTAGCT 001360
001361 CAAGTGATTC AGAATGAAAA GACCTTGGCA CAGACCTGTT AAGGAAGCTC CATATAAGGT GAAGAAAACA ACATGCTCAG 001440
001441 CCATGTCCTT GCCTTCTGCA CACGGTAGTG CATTCACTGC CTGAGAATTC AAGGCTAAAA CAAAAAGAGG AGCTTTTGTT 001520
001521 CCAACAGATA AGTACTTACC TTTTTCAAAA AATGCATAAG CTGTCCTGGG TGTTTAGCAG TTATTCGCAC AGCTTTCCAA 001600
001601 AGACTCACAG CATTTAAAAG CTAACTCTAC AGAGATTCAA CAGCTTCTTC CAGATCCCAC CACAGTGGAA AAGAACTCCG 001680
001681 GTGTCCTGGC TCCCTGTCCA GCTCTTCTCT CTCCCCTTCC AGCTGCCAGT TCAGCTTTAA GAAGTTCATT CTCCACATTC 001760
001761 AGATGCAGGC AAATGCGTTT GACTTGAGCA TATTGATTTC AGGCAGGTGA GAGTGGATGT AGCGATTCAG CTTGCCAACT 001840
001841 TTCCCCTCCA TCCCCTGCAC CCTTTCACCA AAAGATATGC CTAAGAGTTC CCAAGAGACG TCTAACATAG GCCTGCATGT 001920
001921 CAGCCCAGTC TTCTGGGCTG AGCTGCTGCA CTGTTGCTGG CCTTGATGGC TGAACCTGAT CTCTGTTGTG GCACCCACCA 002000
002001 CTCTTTCTCA AGCCTTGACA CCTTGGCAGG CTTTGGCAAA AAGAGGAGAG CTGTTCTTCC TCGGCATTAT GTTCACTTAG 002080
002081 CAGGGTCCCA CAGCAGGATT GCTTGGACCC CAGAGTATTG TAGGGCTTAA TAAGACCAGC CCTTTCATCT CACACGCTCT 002160
002161 ATCCTTTCTC TCACTGGTGC ACCCACGTCA GGTGTCTTGA GTGGGGAGTG CTCGAATATC TGCCACCAGC TTGAGTCAGA 002240
002241 ACCTCGACTT CCCTCAGCTT TTCAGGGTCT GTTACTGAGT CTGGTCCACA CTCCAGGGTC TTTTCCTCAC GGTCTGGGTC 002320
002321 TGGTCTTTTT CAGGTGCCTA CCTTTCCTCC CTGCAAACTG CCTTGAGTTG CCTCCCCTTC TCCCTTGATA CAGAGAGAAG 002400
002401 ACAGCTGTCT GCAAACCAGA AAGAGAGTCC TCACTGCACT TCATATCTGC CAATGGATCC TTGCTCTTGA ACCTCCCAAC 002480
002481 CTGCAGAATC ATGAGAAACA AACATTGTGT AAGCCACCCA CTCTACAGTA ATTTGTTCTA GCAGACCGAG CTGACTGAGG 002560
002561 TATGGTCTCA TCACGTAACC ACTTTTAACC TTAGTCTTTC TATCTGTAAA GTAAGTGGGT TAGAGAAATC ATTCTAGAAG 002640
002641 ATGTTTCTGC TTTAAAACAA ATTCTTCTAT TTCCTTTCCA ATGTGAAGTT TGGGTGGTTT TGACCTTTTC TCCTTCTTTG 002720
002721 TGATGGTTGT TTTGAGTTTA CAAGGAATCA AATATTTTGT GGGCATCCTG GGGTTTGACT GTTCAGGGGG GAGCCAGAGA 002800
002801 CAGTACAAAG CCAGTTTCCC ACTTTTCAGG CTCACTGAGT GATTTGCAGA ATGGAGGGGG CTTCTGACAC ATGGAGTGTG 002880
002881 AATTGTGTGC ATAAGCAACT CAAAACCCAG GCAACCTTCA GCTCAGGGTT TCCTGTGAAT CAGCTGGGTT TTCTGGCATA 002960
002961 GCAGTGAGCA AGTGGCATTA ATGAGGTAGG CATAAGATGA TGCCAAAGGG GCTCGTCCAT TCAGTAGGAG TTGGGCATAG 003040
003041 CAGTGGTGGA GAAACAATAA ACGAGGGGGC TGTTTTATCC CCTCCCCCTC CTTTTTTTTC TTTTTCTTTT TTTTTAACAG 003120
003121 TAGCAACGTT TTGGCTGATT AAAGTACTTT TCGTGGTTCC GGGAGGGAAG TGCCTTTTGT CACAAGGGAA GATCCAAAGT 003200
003201 GTGGCAGAGA GTGACCAGGT CCCAGACAGG CAAAATCAGC AGATGTCCAT TCGCAAGCCA AAAGAGCTCC AGCATCCTGC 003280
003281 TGGTCCTTAG AGCAGGCTGT GCCTGGGAGC CATCTTTGAA TTCCTCTGAG CTCAGAGGGA GAGAATACCT CTAGTGAGGA 003360
003361 TCCTGGAAAC CTC
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Predicted Small Protein

Name NONHSAT076591_smProtein_2996:3289
Length 98
Molecular weight 10444.9987
Aromaticity 0.0824742268041
Instability index 49.1432989691
Isoelectric point 8.98004150391
Runs 19
Runs residual 0.0643375334097
Runs probability 0.0538820554301
Amino acid sequence MMPKGLVHSVGVGHSSGGETINEGAVLSPPPPFFSFSFFLTVATFWLIKVLFVVPGGKCL
LSQGKIQSVAESDQVPDRQNQQMSIRKPKELQHPAGP
Secondary structure LLLLLEEEEEELEELLLLLEELLLEEELLLLLLEEEEEEEEHHHHHHEEEEEEELLLEEE
ELLLLEEEEEELLLLLLLLLLEEEEELLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTiiiii
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