NONHSAT076650

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT076650

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4956 nt

Genomic location

chr2+:209688900..209723402

Exon number

4

Exons

209688900..209689074,209690123..209690431,209709858..209709950,209719024..209723402

Genome context

Sequence
000001 tttttgtttc taaacccagg acattgagat ctgctggttg gagatcttag tgcccaagga agaatgcttg caaaaggaga 000080
000081 tggaacagtg tttctgttgc attggccact gagaatatct ggttattttg aatttgtcac agtctgcagc taaaaggcga 000160
000161 acaggaaaag aagagagagc ggtaatttga atgatagcag atttcacatc aggaaccaat gaagctagat aagaatgcaa 000240
000241 catctttgat gtctaaaaga aacaaaaagc caaccttgaa ttctttattt agtgaagtta cccttcagaa atgacggcaa 000320
000321 aataaagatg ttttccaata aaagacaact atgagaattc ttcaccagca gtcctattgt atcagaacag ccaaaagaag 000400
000401 tttgtcagcc tacagggaat tatatcaaag ggaagacttg accttgaaaa tgaatgagga atataagaaa ttgatattat 000480
000481 ctggGAATTC ACTGAATGTC TATCTATCAT GTATGCTGTT GGAGGCACCT GTCTTTCAGT TCAGAGGTTA TGGATGTATC 000560
000561 TATCATCAGT ATTTCGGgaa gtcagggacc cggaacagag ggacttaatg aagctgtggc agaagaaaaa attatgaaga 000640
000641 tttcatggac atttattagt tccccaaatt aatactttta taatttctta cacctgtctt tactgcactc tctgaacata 000720
000721 aattgtgaag atttcatgga catttatcac ttccccaatc aacactctta taatttccta tgcctgtctg tactttaata 000800
000801 tcttaatccc atcatctttg taagctgaac atgtatgtcc ctcaggaccc tgtgatgatt gtgctatctg cacaaattgt 000880
000881 ttgtaaagca tgtgtgtttg aacagtatga aatctgggca tctagaaaag gaacaggata acaacgactt tcagggaaca 000960
000961 agggagataa ccattaggtc tgactgcctg gaagccaggc aggaccaagt catatttctc ttattgtcaa aaacgggtaa 001040
001041 gagaaatatt gctgaattct ttccccagta aggaatatta ataactaaca accctgggaa aagaatgcat tcccgggggg 001120
001121 cggcctctaa aatggccgct ctgggaatgt ctgctttatg cagttgtaga tagggatgaa acatgccctg gtctcctgca 001200
001201 gcgcccccag gcttgctagg attaggatat ccagcctggt gaattttagt cagactggtt gtttgctctc aaaccctatc 001280
001281 ttctgaaaag atgttatcaa tgacaatgtg tgcccggtgg gacatgagac ttcctcagca attctaattt tgccctgatc 001360
001361 ctgtgatctc actctgcccc catctgcctt gtgatatttt attgcccttg aagcatgtga tctctgtgac ccacacccta 001440
001441 ttagtacacc cctctccttt tgaaatccat aataaaaact tgctggtttt gtggctcaag gggcatcacg gaacctgccg 001520
001521 acatgtgatg tctcccctag acacctagct gtaaaattta tctcttttgt actctttccc tttatttctc agaccagctg 001600
001601 acacttaggg aaaatagaaa agaacctatg ttgaaatatt gggggctggt tcccccagta catttcgacc ttggagaatc 001680
001681 tgatgatttt gtgcctgatg gttttctttt gtagtatctt gctggggttc tccgcaagat ttgaacattc tctgatttga 001760
001761 atgttggcct ctaggttggg agaattttcg tggatgatat ccttaaatat gttttacaag ttgcttactt tctctccctc 001840
001841 tctttcaagg attcaaatga gacatagatt tgttctcttt acataatccc gtatttcttg gaggttttgt tcattctttt 001920
001921 ttattctttt ttatttttat ctgactgtgt tagtttggag aacccgtctt caagtgctga gattctttcc tcagcttggt 002000
002001 ctattctgtt gttaatacta gcaattgcat tatgaaattc ttgttgtgtg tttttcagct ctatcaggtc agtttggttc 002080
002081 tttcttatac caaccatttt atcttttagt tcctgtatca ttttattgta atctttagat tccttggatt gggtttcaac 002160
002161 tttctgctga atcttgatga tcttcattct tatccacatt ctgaaatata tttttgtcat ttcagccatt tcagcctggt 002240
002241 taagaagcct ttctggggaa ttagtgtagt catttggggg aaagaaaaca ctgtggcttt ttgaattgca gagtttctgt 002320
002321 gtgggttctt tcttatcgtg tgggctgatg gtcctttaac tgcagtgtac agtgaggtga cttcttttct tgatgttttc 002400
002401 agaaggctga gactttgtgc aaagtcttta gttgttgctg agttcttctt cttggtttca caagggggta tattagcaaa 002480
002481 atattttgat gttgaagttt gggctgtgat ctagtagatg gttcttaagc ataatgaact gtacatagtc tcttgctcag 002560
002561 ccatgtgact cctctgtatt tcctcacaat tgcagcctgc tttctctcag ggcctggaaa gtgtgggctc ctctcccact 002640
002641 cgagtgctgg ctgcagatct tgtcttggca atcccgaact gtacaccact gtcctggggt gaactcagct ttttaggctt 002720
002721 tattttcctt ccccagcttg taagcaagag gagaagctac cttggcagca gctgaggcag agggcctttc acttgtttct 002800
002801 tggatctcca ctccagagaa atgcagaacc actaccaatg ggtgcaatta gcctgggatg gggaggctga gttgtgggcc 002880
002881 tgatcctggg gatccacggt accaaggaaa tggggcaggc tcttggagga ggcagactgg cttcttcttc tccttagggc 002960
002961 aactgcaact acaacttttg ggtaaagcac ttagagtctt tgttccttcc ccagtccgag ggcagcaagg gcagtaccac 003040
003041 tgcagcagca gtagcagagg ggcttttagt tgcttctggg tgcccctccc ctagggaaac acggagccac tagcagtgga 003120
003121 acggtcagct gtgggtgagg tagctgttct gtagtcccaa gctgaggctc ctacctgctg aagactgggt agggactcac 003200
003201 aggggataga gactgaattc ctctccatat ggtggctgca gcatgctaga tatcctggca tagcaaccag gccctttgtg 003280
003281 ctttccccag ctcaaggggt agtaaggatg gtaccacagc agttgcaatg gtagagagct gtgggttgtc tctgggattt 003360
003361 cctccataga gaaaggcaga gccaccacca actgcagtgt tcaggcatgg ttagggtgtt tgtgctggga gcccaggttg 003440
003441 agaggcactg cccagtgaag attagtggag ataggacctg tgtgtaaaac agtctggctg cttttctgta agactgctgt 003520
003521 gctgtgctgg gggccaatgt tacttcctaa ttattattgc atttcctcct gaacctgagg gcaataggag tgagggctgc 003600
003601 agagcagcaa aaatggtggc ctacctttcc ctctgagagc tctgtcccag gaaagttcag agctgctaac cagctcaaga 003680
003681 gcccaggccc agtatggctg gcgtcccggg ttaggaggcc ctgccctgtg aggaatagtg ggttcaggga cccacgtgga 003760
003761 aaactggctg cttttctgtc aggtggagtt acatcgctgg gggtccttgt tagtctccaa tcactgtgta ccctcccaag 003840
003841 cctaagggca acagggccga gggttgtaga gcagcaaaaa tgtcagcctg ccccttcctc tgggacctcc atctcaggga 003920
003921 agtggagagc tgctcccagc ccaagaactc aaacagggtt ggggtgacct cattagcatc ccaggccagt gagctgtatc 004000
004001 ctgccctacg agttgcagtg gaggtgaggc ctgcagtccc tcattgctca gccttgtaga ttcaggccct ttcctgggag 004080
004081 tctgcaaagg agcctggcct cccccattgc cagaactgca gctactggtg ttggggtgct ggagaatcca aggctcctgc 004160
004161 gactctgctt gtgcctgtgt ggcttggtct gctcagactc cccacagcac ttcatgtggg tgtggaggct cctgtgttgg 004240
004241 gaaatcacag ggaatgtcct gagcccaggg atgcaaaggc tgtagcagaa gtatgagtcc ctgcagacta tcactcagtc 004320
004321 actcatcatt tccccacagt ataggggtct cctctatctc catgccagtt ccaggtaggc agtcgtccta tcttgctctt 004400
004401 ctctgttctc tgtgggtaac attgtttcct tgatgaatcc caatgtgtcc acctggatgt tctagttgaa gagctagtgt 004480
004481 tacttgttac ttttccttct ttccacgaga gcagcacaca ctagctgctt ctagtcagcc atcttggCCC CAGAACCTGG 004560
004561 TTTTCTCATA TTTTTGACTT GTGATTTATG ATGCAAAAGA GGTGTCAGTT TGTGGACACA TCAGAAATTA CATTAATTGT 004640
004641 TTCTGATATT TCATCTCCAA ATAAAAATCA AACCTGTACT ATCTTTCCAC ACTTGTTATT AATTGAAATA TTTAAACCTC 004720
004721 TCAACTGCTA AATAGATCTC TAAATTATGT GACTACTGCA AGACCGTGTA AGTGGCTTGG CACTGTTAGA TGGGGTGCTT 004800
004801 TATTACAACC TAATGAATTA AGTGTACTAA ATTTTTAATC ATTAATTTCT AGTATCAAAA TGGTGAGTAT AAGGTGTGAA 004880
004881 GTTTTATTTA ATGACTTAAT TTTGAGTCTT AGTTCCAGGA AAGACTTCTA AATTAGAATT CACCCTAGGA TAATTA
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Predicted Small Protein

Name NONHSAT076650_smProtein_350:607
Length 86
Molecular weight 10052.5179
Aromaticity 0.129411764706
Instability index 40.3705882353
Isoelectric point 9.58233642578
Runs 13
Runs residual 0.0163992869875
Runs probability 0.025117878059
Amino acid sequence MRILHQQSYCIRTAKRSLSAYRELYQREDLTLKMNEEYKKLILSGNSLNVYLSCMLLEAP
VFQFRGYGCIYHQYFGKSGTRNRGT
Secondary structure LEEEELLLLHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHHHHHLLLLHHHHHHHHHHLLL
LEEEELLEEEEEEEELLLLLLLLLL
PRMN -
PiMo -