NONHSAT076663
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076663 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2116 nt |
Genomic location |
chr2+:210887131..210889246 |
Exon number |
1 |
Exons |
210887131..210889246 |
Genome context |
|
Sequence |
000001 TTCATAGGGT AGTTCATACA TGCATTTCCA AGGGGAGTGG GTCATTGCCA GTGTTTTAAA AACTACATAG GGGTGTGTGT 000080
000081 GTGTGTGTAT GTTTATTTTA TACACACATA TTTGTATATT CTAATATATT ACTAAGGCAA TTTTAATGAA TTACCATGTA 000160 000161 TATAAAAAAA TAGCTGTCAC TTGGCACACA GGTTTGTATG TATGTGTATA TATATATGTA TGTATGTATG GTGTGGGTAC 000240 000241 ATAGTCTTAA AAATTACCCA GTAATGTGAT TTGACATCAA GTTGCAGCAA TTAATATCTT GGTGTTTGTA AGTAAGTTGC 000320 000321 ATGATAAACA CAAATGACTA CCACTTGTCT GTAGATGAAA ATCTGGTTAC CCTTATGGTT CCAGAAGGAA AAACAGACTT 000400 000401 ATCTTGCCTG TTTCATAAAC AGCATAAAAG ATTAATACAT GCAGAACATG CTCTTATTCT GGAGGGGATG GGGGATCCAG 000480 000481 AACAGGGCTT TATTTCCTCC CATCTTTCCT ACATTTACAT AGTTTTCTTA ACCTGTTCCC TGTCACCTAT TTTTTTTAAC 000560 000561 ATTAGTAAGT CCTAGACCAA AGGTTTTGTA TTCTTCCATT CCATCTGACT GCTTTTTTGG ATGGTGGCCA TTCTCTGGTA 000640 000641 CACTGGTACC GAAGATTTCA CCATGGAAAG CTGTGCTTGA CCTTTCAACC TGATCCTTTT TTTCATCTTG ACATAATAAG 000720 000721 GCTGCCATGT CTTCACCCTT CAGTGGAAAA GCCCGTCGTT CCCACCACAA AGACTGAAAG GGGAAAAATT TTCAGTTAAG 000800 000801 TTTCAACTAA CTTGTTTTGT TTAAATTCAT CTAACAAGTA ATCTGTACAT GTCTATATTG TAATAATTGT TCTGTTCTTT 000880 000881 AGCACATAAA TGTACAATTT TTCATTTCAA CTTAAATAGC AACTCAAAAT GGAATATATT GAGAATTGTT GAGTGACTTT 000960 000961 TGGGATTTAT TTCTTTACTT TGCCTCTGCC AAGAAGAGGA AATGCTGCCA TAGGCAGTGG TCTTCATTTC CGACCTAAGA 001040 001041 GTACTTTGGG AAAGTGTTCT TAGGTTTGAT ATACTTCTAC AGTATCTTCA TTTTCATTAT TAAAGGTACC TATTAACTTT 001120 001121 TTCTTTCCTG AGCTTTCTGC AACTTGCCTA TTAATTCTAT AATCTCCATT CCATTCTAGA TCTAGTTCTT TTTCAGTATC 001200 001201 TATTTAGGAA GAAAGGTGTA AGAACTTTAT GGATGCAGTG TTAGAAAGCA GTCCCTTTAA AGTAGGAACT GGGTCTGTGG 001280 001281 TGAGGCATGT AAAAATCTTA AGATATGAGG AGAAAGAAAT AGCAGCTAAC TTTGGCCATG TAGCAGGTGC TATTCTTCAT 001360 001361 TAATCAGGTT TGTTTCGTAA TGAAACTTTG ATAGTACTTC CACTCTCTAA TAGATAAATA AGTACTTGGA AGTTCGTATT 001440 001441 GACTTGTTAC ACAAGGTGAT TATAGTTAGT AGTGGACACA AAATGCTGCA ATACAGATCT TCTATACCTA ACTTATTGAA 001520 001521 TTTGTTATGT AATGATGTAA TAAACTTAAT TTTTTTCAAG TAGTTTCTAC AAACAAGTAG TTAAAAGTCA AGGAATGGGA 001600 001601 AGTTTAATCA TACATATTAC ACTTACCTTG GTTTCTTGAC TTTGATTTAA AGAAGGTAAG CCATATGCAC ACAGATCCTG 001680 001681 GTTCTCTGAA GGAAGCCCAG GAGGACTTGC AGCAGCACAT TGCTGACTGC TACTGAAGTT ATTAGGGTAT TCTTTCAAAA 001760 001761 GCAAGTCCTG TCCTTCAACA TTTTTACTGT AAGCTCTAGC AAGAAAATCA GGAAAACACA ATTATTTTTT ATTTTTTGAG 001840 001841 GTCTTGAAAA TTTATGAACA ACCCAAGGTA TCACTGAGTC AAGTTAACTT GGTAACTTTA AACAGTTTTG CCCAAAGATT 001920 001921 TTTAAAAATT CCCCTGGTGC TATTTATTAT TTTCATACTC AGAGGATGAA ATAGTACTTT ATGAAATATT TTACCGAATT 002000 002001 ATAACAGTTG TGGGGGGAGG GTTATTCTTG TTTTTTATTT GGGTTTGCTT TTGTCTTTTG TCTGACTAAT TAAATGAAAG 002080 002081 ATGCTCCTTA ACTAAAGTGA CTACCAGACT TCACAC |
Predicted Small Protein
Name | NONHSAT076663_smProtein_320:574 |
Length | 85 |
Molecular weight | 9549.9131 |
Aromaticity | 0.0952380952381 |
Instability index | 46.5785714286 |
Isoelectric point | 5.76104736328 |
Runs | 13 |
Runs residual | 0.0207764634516 |
Runs probability | 0.0618808854103 |
Amino acid sequence | MINTNDYHLSVDENLVTLMVPEGKTDLSCLFHKQHKRLIHAEHALILEGMGDPEQGFISS HLSYIYIVFLTCSLSPIFFNISKS |
Secondary structure | LLLLLLLEEELLLLEEEEELLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLEEEL LLLEEEEEEEEELLLLEEEEEELL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL HHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo TTTTTTTTTTTTTTTTTTiiiiii |