NONHSAT076868
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076868 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1466 nt |
Genomic location |
chr2-:218664514..218665979 |
Exon number |
1 |
Exons |
218664514..218665979 |
Genome context |
|
Sequence |
000001 GGAAAACAGG GAGGAAGTGA GCGGTTTGAT CAGCCTGCTA TCACGGTGTT CTGGCTCTCT TATTTAGCCA GGCGCTTAAG 000080
000081 GGACAGATAC ATCACATCCT AAGTTTGGGA AAGGCCTTTG ACCCATGTCA TCTGAGCGTC TCCTCCAGTA GCTCTGAAAG 000160 000161 CTGTGGACAC CAATGGCCAG GATTCCTTCT CCCCTGGTTT TTGAGGATCC CTGGGTCTTC TGAGACTGGC CAGGAGAGGG 000240 000241 ATGGTGGGGC CAGTGGTTGT GTGAAAGCAG GAGGGGCAGC CCTCCTGGAC AAGTGTGATC CCCCTATAAA CGGCTCTCAG 000320 000321 GAGGTTAGTG AGTAGGAGAT TCTGCCTTGT TCTGATGAGC CTGTGCAGGG GCTCCAGGGG AGCATGCTGT CCAGGGGGCA 000400 000401 CAGAAGGGTG GTGAGTGTGA TCAAATCTAG TCTCACTCCC ACTTTTTAGT CTCACTCCTA CTTTTGTCCA CCACCCCTGC 000480 000481 CTCCTGGATC TTCTCCCACT TTTTTTTTCA GCTTTAGGAC CTGGGGAGAT CCTGTGAGTC AAGGCAGACA CCCAATCCTG 000560 000561 CCCCCACACT CGGGGTCCTC CAAGAGGTTG GGGGGCAGAG TCCCAGAGCA GCCCTTTACC CCAGGTCCAG GCCCTGGAAT 000640 000641 CCTGAGACTC GCGTTTCCTT GGCCAGTGGT AACACAGGAC gtgtgtgcgc atgtgcaagt gtggatgtat gtgtgtgcgt 000720 000721 gtgtTTTGCT CATTTCTTTA GGGAACTTGG GAGTCGGGGT TGGAGGTGCT GGGCAATGGA ACTTCAAATT CAATGTCGCC 000800 000801 CAGCAGTGAG GGGAGTCGGG AGGTGAGGCC TGTAGGCCAA CCAATTGGTG GAGTCTCAGC GATAGCCCAG GTGAGAAGTG 000880 000881 GTTCACCCAG AGGGGCAGGG TGGGGGCCTC GGGCAGATCT GTCCCTCTTG GCACCTCTGT CCTCAAATGT CCAAAATGTT 000960 000961 GGAGGACCTC TGTTCATATC CCACGCCTGG GCTCTTGCCA GCAGTGGAGT TACTGTAGAG GGATGTCCCA AGCTTGTTTT 001040 001041 CCAATCAGTG TTAAGCTGTT TGAAACTCTC CTGTGTCTGT GTTTTGTTTG TGCGTGTGTG TGAGAGCACA TCAGTGTGTG 001120 001121 CAGGCTGTGT TTCCCCATTT CTCTCCTCCC TTCAGACCCA TCATTGAGAA CAAATGTAAG AAATCCCTTC CCACCACCCT 001200 001201 CCCTGCCTCC CAGGCCCTCT GCGGGGGAAA CAAGATCACC CAGCATCCTT CCCCACCCCA GCTGTGTATT TATATAGATG 001280 001281 GAAATATACT TTATATTTTG TATCATCGTG CCTATAGCCG CTGCCACCGT GTATAAATCC TGGTGTATGC TCCTTATCCT 001360 001361 GGACATGAAT GTATTGTACA CTGACGCGTC CCCACTCCTG TACAGCTGCT TTGTTTCTTT GCAATGCATT GTATGGCTTT 001440 001441 ATAAATGATA AAGTTAAAGA AAACTC |
Predicted Small Protein
Name | NONHSAT076868_smProtein_1277:1447 |
Length | 57 |
Molecular weight | 6533.9253 |
Aromaticity | 0.178571428571 |
Instability index | 40.4125 |
Isoelectric point | 4.55645751953 |
Runs | 10 |
Runs residual | 0.0252732240437 |
Runs probability | 0.0453453453454 |
Amino acid sequence | MEIYFIFCIIVPIAAATVYKSWCMLLILDMNVLYTDASPLLYSCFVSLQCIVWLYK |
Secondary structure | LEEEEEEEEELHHHHHHHHHHHHHHHHHLLLEEEELLLLHHHHHHHHHHHEEEEEL |
PRMN | LLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHHHLLL |
PiMo | iiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTTTiii |