NONHSAT077164
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077164 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
824 nt |
Genomic location |
chr2+:225159647..225160470 |
Exon number |
1 |
Exons |
225159647..225160470 |
Genome context |
|
Sequence |
000001 ATGCAGATTT TTACAAAAAC TCTTACAGAG AAGACCATCA CCCTGGAGGT TGAAACTTCA GATACAATAG AAAATGTAAA 000080
000081 GGCCAAGATC CAGGATAAGG AAGGAAATCT GCCTGGTTAG CAAAGACTTA TCTTTGCTGG TAAGCAACTG GAAGATGGAt 000160 000161 ggtatggttt ggctctgtgt ccccacccaa atctcatctt gaattgtagc tcccataatt cccatttgct gtaggaggga 000240 000241 cctggtggga gataactgaa tcatgggggt gttttccctc atactgtgct catggtagtg agtaagtctc atgagatctg 000320 000321 atggttttat aaggggtttc cactttcgtt tggctctcat tctctcttgc ctgccaccat gtaagatgtg cctttcacct 000400 000401 tccaccatga ttgtgaggcc tccccagcca tgtggaactg tgagttcatt acacctcttt ttctttacaa attacccagt 000480 000481 cttgggtata tctttatcag cagcatgaaa acacactaat aAAAATGGGC ATCCTTTGTC TAACTACAAC ATTCACAAGG 000560 000561 AGTCTACTCT TTGTCTCATG CTGAGACTTT GTAGTGGCTC TAAGAAAAGG AAGAAGTCTT ACACCCCTCC CAAAAACAAT 000640 000641 AAGAAGGTGA AGCTGACTGT CCTGAAATAC TATAGGATGG ATGACAATGG CAAAATTAGT AGCCTCCGTC AGGAGTGTCC 000720 000721 TTCAGATGAA TGTGGTCCTA GAGTTTTTAT GGCCAGCCAC TTTGACACAT TATTGTGGCA CAGGGTGTCT GACTTATCGC 000800 000801 TTCAACAAAC CAGAAGACAA GTGA |
Predicted Small Protein
Name | NONHSAT077164_smProtein_680:823 |
Length | 48 |
Molecular weight | 5364.3118 |
Aromaticity | 0.106382978723 |
Instability index | 51.0744680851 |
Isoelectric point | 8.76885986328 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0409821586293 |
Amino acid sequence | MTMAKLVASVRSVLQMNVVLEFLWPATLTHYCGTGCLTYRFNKPEDK |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHHHLEEELLLLLEEEEEELLLLL |
PRMN | - |
PiMo | - |