NONHSAT077318

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT077318

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2029 nt

Genomic location

chr2-:231850640..231860763

Exon number

6

Exons

231850640..231850825,231851699..231852894,231856484..231856751,231857049..231857117,231859992..231860100,231860563..231860763

Genome context

Sequence
000001 CAGGGCTTCA AGGGACAGTC TTCTCTGCAG ACACCAGCCT GGTGTCCTCC TTCATCCCAG GCTGCCAGGC TAGGCAGGGG 000080
000081 ACAGCGGCTG CCCTGGTCCT CACAGCCCTG GCTACGGGGC TGGTGACAGC CAGATCCTCA TGCTTCTGCG ACCTGAGCGC 000160
000161 TGCCTTCAGA CACCTCTCTG CTGGCGTGTT CCTGGGTCCA TGATGGAAGA AGGAAAAGTA TTTTTAAAAG ACAATCTGAA 000240
000241 GCTCATACTG TGACTGCAAC ATAAAATGTG TTCACCTGAG GAGACTGCTT TCATCGCCAG TGTGTCACAG ATGGTGGAAA 000320
000321 CCTCAGAAGG CCACAGTCCA GAGTAGGGGC TTAATGCAAG CTGCTGGAAC TGAATAAAGG TCTCTGATGG TTCTGGTTTC 000400
000401 CTGGGCACCT AGAATAAGTG TGTCACCATT TGTCCTGAAG CTGACTTCtc tgagctggat ggcaccctgg acatcaacca 000480
000481 gcccttcacc ttcacgtcac acaggaggga cactggtcca tagagaggat gcctgctctg gtcaccagct ggagagtggc 000560
000561 agaccttggg tacctgacct ttggactctg ccacacagag cacttcctca gtccctcctg cTGCCCCTGG CAGGGTGGAG 000640
000641 CTGGCAGggc agctgatcca ggaccgtcca cttccaagcc agcaggagga tggaaaagca gaatggaggg gaaacaacct 000720
000721 cctttgcagg gcgtgactcg gaagttggac acatcatttc cagccacatt ccatggacca gaattagccc tgtgaccaac 000800
000801 tctggctgcc agaaaatctg ggaaatacag tctctgcttg ggcgatcaGG CAGGCAGTTA TATCTTTGGG AACATCTCTC 000880
000881 ACCCCCTGGG AACACCTGAG CAGAAACTGA AGGACATTTA ACAGATTCTC CTTTGTGTCT AATAAGAATT GCCCCCATCA 000960
000961 GTCGGGGctg tcctaggtgc tgggtacata ggtcatctat acacaaccca gcaatggaga gcacaccatt cccaggctgc 001040
001041 agatgcagaa actgtggctc ggagagttaa gcgtcttgtt cagattcagt cagctggtag atggcaggtc tgggattgag 001120
001121 acccaggcct ggctgGTCCT GCCAGGACAC AGTATCACAG CTTTGACTGG GAGCTTCTTT TTGTTTACAT ATATTTTTTA 001200
001201 TGCTCAATGT GCATTCCTTT TGAAATACAC AGAAAAGGGA AAGAAGCCGG AGTCCTGCCT TGTGTAGGAG GGATAAGTTA 001280
001281 GAGGTGTGCA CCGGGATAAA TCTGCCTCCC GCGctggccc tggccctggc cctggccctg gccctggccc tgatcctgCT 001360
001361 CCTGATTCTG GTCCTTGGGG CCTGGGCGGC GATTCCCGGC GCTGGCTGAG CGTCACCGGC CACCAGAGGG CGCTGCCGGG 001440
001441 CTACCGGTCC GGTCGCCCGG GGATCACAGC CTCAGCGGAC AGGAAATGAT CAACAGCTTC TCCTCTCGGA TCCACGTGGA 001520
001521 CTCAAGGAAT CTCCGGGGGG CAGGACAGGT GCAGAGCCGA GTGCAAAGGT GGAATTCTAT TCCCAAAGCA CATCCCGCGC 001600
001601 CCCTTTCCTC TGCAAAGTCC CGGAACCGCG TGACTCCGGA TGAGTTATCG GGGCTGGAAC CGAGGGTTCA GCCCCCTGCG 001680
001681 CCTCTGTGTG TCCCGGTCCC TTTCCTCCAA GTAGACAGGA GGCATCTCCT CATCGGCTCA GTTCACATTC CTCCAGGGGC 001760
001761 TCAAAGGGGA CCCAGTCCCT GTCTTGGGAC ACCAAGTCAG GCAGACTCCA GGAGAGAGGA AGGAAGATGA TTCCCGCGCT 001840
001841 CAGgtgggcg ggtcctgctc cctctgttga agacctgaag acaaagattg accctcaccc ttcacctccc acctcttcct 001920
001921 caccttggaa aagaaaaaca ttcctgagag gggggatttg tcagcagaag gctttgggac tagaactgca gcatcagctc 002000
002001 ttcctggttc cccagcgccc aggcctacc
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Predicted Small Protein

Name NONHSAT077318_smProtein_386:655
Length 90
Molecular weight 9838.189
Aromaticity 0.0898876404494
Instability index 63.4898876404
Isoelectric point 9.48712158203
Runs 11
Runs residual 0.0196078431373
Runs probability 0.0307125307126
Amino acid sequence MVLVSWAPRISVSPFVLKLTSLSWMAPWTSTSPSPSRHTGGTLVHREDACSGHQLESGRP
WVPDLWTLPHRALPQSLLLPLAGWSWQGS
Secondary structure LEEEEELLLEEELLEEEEEELLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLL
LLLLLLLLLLLLLLHHHLLLLLLLLLLLL
PRMN -
PiMo -