NONHSAT077433
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077433 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1194 nt |
Genomic location |
chr2+:233562015..233601358 |
Exon number |
5 |
Exons |
233562015..233562102,233565295..233565364,233568134..233568199,233599865..233599948,233600473..233601358 |
Genome context |
|
Sequence |
000001 GTGACGTGCG TGGCGACGTG TCGGCCATCT TGTGTTGTTG AGGCTGAGGA CTGACTGGGG TTCTGAGACT CCCTGTCCCG 000080
000081 GACCGCAGAT TATAGTGGGA CCAGTCTCAT TAGGTTGAAT CTACAGCCTA TGTTGGTGTT AACCCAGGTC TCTTAGAGCG 000160 000161 TTAAAAGGAT CTGAACAAAG TCTGCTCAAA TCTCCTGCTG TGAACCAGCA GAATTTTTGA ACAGGTTTCT TCACATATAA 000240 000241 AAATCTATTG TAAAAATACG GAAAAGAATG GCAGCGGAAA CGCAGACACT GAACTTTGGG CCTGAATGAT GTGTTTGGAC 000320 000321 CCCGAATATG GAATTCTCAT GGAATTTTGA GATCCATCAC ATTGTAGTGT GGCTTCCCCC CCTCCCCTCC TTCCTTTTTC 000400 000401 CCCAAAGTTG GTGATTGAAG ATCCTCTCTT CAGTGGCATC AATAATAATA ATTACTTTTT CTATTCAAAC CTCGGGCAAC 000480 000481 CCCTTTGGTA ATATCAGAAG TAGTATCTAA AATAGATAAA TTGGATTTGT GTCTTAAACT CTTGGTTGTT CAGGTGGGAG 000560 000561 TGGTTCAATA AATGATGCAG ACTTCCTGTA GTAACTCTAT TTGAGGAGTC TTATTAACTT ATCCTATTAG AAATATTTCT 000640 000641 TTTTATTAAT ATATGTAATC TCGAAGTTTT CTTAACCTTT ATAGCCAGCA TTTGGAGACT GAGGAGAAAT CACTATTTGA 000720 000721 AGTTCTAAGA ACCGATGGAA CTCCTGTATT TTGAGAGTTT ATTTAGAACA TGTTAACCTA AGTAATGCTG TACTTGTTTT 000800 000801 AGTTATTCCT TTATATTTTT AAAATGATTT TCTTAGTATC AAATTAATAT GTTTCTAAAA AAATTAGAAA TAACTAGTAA 000880 000881 GCCAGAAata atttcaacat ccatggtaca cactgtaaat accttggtgt atctttccag gtggttttat gtatgcttat 000960 000961 ttgtgtatat atacacttat tttttacaaa aatgggatca tactgtacct tcagttttgt agcctgctta aagaaataac 001040 001041 caaatcagaa acatcttttt ttaatcaata aatattttct gttgtattaa atggttgcat tgtatggatg taccatcatt 001120 001121 tattcaacta gtcttctaga tgtgacatat agaagctgtt cttgattttt cattataaaa atatttttaa tgaa |
Predicted Small Protein
Name | NONHSAT077433_smProtein_848:1021 |
Length | 58 |
Molecular weight | 6894.1228 |
Aromaticity | 0.19298245614 |
Instability index | 42.0633333333 |
Isoelectric point | 8.85345458984 |
Runs | 8 |
Runs residual | 0.0135964912281 |
Runs probability | 0.0461159689102 |
Amino acid sequence | MFLKKLEITSKPEIISTSMVHTVNTLVYLSRWFYVCLFVYIYTYFLQKWDHTVPSVL |
Secondary structure | LLLEEEEELLLLEEEEELEEEEEEEEEEEEEEEEEEEEEEEEEHHHHHHLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTooooooooooooo |