NONHSAT077433

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT077433

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1194 nt

Genomic location

chr2+:233562015..233601358

Exon number

5

Exons

233562015..233562102,233565295..233565364,233568134..233568199,233599865..233599948,233600473..233601358

Genome context

Sequence
000001 GTGACGTGCG TGGCGACGTG TCGGCCATCT TGTGTTGTTG AGGCTGAGGA CTGACTGGGG TTCTGAGACT CCCTGTCCCG 000080
000081 GACCGCAGAT TATAGTGGGA CCAGTCTCAT TAGGTTGAAT CTACAGCCTA TGTTGGTGTT AACCCAGGTC TCTTAGAGCG 000160
000161 TTAAAAGGAT CTGAACAAAG TCTGCTCAAA TCTCCTGCTG TGAACCAGCA GAATTTTTGA ACAGGTTTCT TCACATATAA 000240
000241 AAATCTATTG TAAAAATACG GAAAAGAATG GCAGCGGAAA CGCAGACACT GAACTTTGGG CCTGAATGAT GTGTTTGGAC 000320
000321 CCCGAATATG GAATTCTCAT GGAATTTTGA GATCCATCAC ATTGTAGTGT GGCTTCCCCC CCTCCCCTCC TTCCTTTTTC 000400
000401 CCCAAAGTTG GTGATTGAAG ATCCTCTCTT CAGTGGCATC AATAATAATA ATTACTTTTT CTATTCAAAC CTCGGGCAAC 000480
000481 CCCTTTGGTA ATATCAGAAG TAGTATCTAA AATAGATAAA TTGGATTTGT GTCTTAAACT CTTGGTTGTT CAGGTGGGAG 000560
000561 TGGTTCAATA AATGATGCAG ACTTCCTGTA GTAACTCTAT TTGAGGAGTC TTATTAACTT ATCCTATTAG AAATATTTCT 000640
000641 TTTTATTAAT ATATGTAATC TCGAAGTTTT CTTAACCTTT ATAGCCAGCA TTTGGAGACT GAGGAGAAAT CACTATTTGA 000720
000721 AGTTCTAAGA ACCGATGGAA CTCCTGTATT TTGAGAGTTT ATTTAGAACA TGTTAACCTA AGTAATGCTG TACTTGTTTT 000800
000801 AGTTATTCCT TTATATTTTT AAAATGATTT TCTTAGTATC AAATTAATAT GTTTCTAAAA AAATTAGAAA TAACTAGTAA 000880
000881 GCCAGAAata atttcaacat ccatggtaca cactgtaaat accttggtgt atctttccag gtggttttat gtatgcttat 000960
000961 ttgtgtatat atacacttat tttttacaaa aatgggatca tactgtacct tcagttttgt agcctgctta aagaaataac 001040
001041 caaatcagaa acatcttttt ttaatcaata aatattttct gttgtattaa atggttgcat tgtatggatg taccatcatt 001120
001121 tattcaacta gtcttctaga tgtgacatat agaagctgtt cttgattttt cattataaaa atatttttaa tgaa
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Predicted Small Protein

Name NONHSAT077433_smProtein_848:1021
Length 58
Molecular weight 6894.1228
Aromaticity 0.19298245614
Instability index 42.0633333333
Isoelectric point 8.85345458984
Runs 8
Runs residual 0.0135964912281
Runs probability 0.0461159689102
Amino acid sequence MFLKKLEITSKPEIISTSMVHTVNTLVYLSRWFYVCLFVYIYTYFLQKWDHTVPSVL
Secondary structure LLLEEEEELLLLEEEEELEEEEEEEEEEEEEEEEEEEEEEEEEHHHHHHLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTooooooooooooo