NONHSAT077507

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT077507

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

730 nt

Genomic location

chr2+:234647598..234650603

Exon number

3

Exons

234647598..234647701,234649334..234649521,234650166..234650603

Genome context

Sequence
000001 gggtccaggc ccccactgct gtgtgcagcc tcaggacttg gtgccctgtg tcccagtggc tccagccatg gctaaaaggg 000080
000081 gccaaggtag agctcaggcc attgCATTTT AGGGATTTCA AGAGGGTCAT CTTTGCACCA CAGGAAATGC CCCCTTTTAC 000160
000161 ACTCTGAAAA CCTTATCAAA CCGTTGTATA AAAGATGAAT ACCCACATAA CAGGCTCTAG CACTGTTCTG TTTTTGAGCT 000240
000241 GAGACATTTT AAAAGGAGAT TTTTCAATTC TAAAAATTCT TTAAATAAAA TGACAGTCTG TCTTATTCTG ATACTTCTTT 000320
000321 TATGGTTATT GTATGAGAAT CAACTACCCA GGCACCTCGG AGCATGTTGA TTTCAGAGTT CAGTGTCAGA CCCCATGAGC 000400
000401 CCCTGTGGGA TGGTGCCAGC TGACTGCCAT GTTCCTGCTG TTTATTGCTT GGGTGCCATT ACATGCAGAG TGGACTCTGA 000480
000481 GGGTTCTAGA GCATATCCAA ACCCATATCA CACTCTTTGT TGGTTAATGA TGTGTTCAGG CCATGATTTT TCTGTAAAAA 000560
000561 ATTACCAGCA TGCTGCTCTT AATTTTTTTC AGCCTATCCA GTTCAGTTGC CTTTTGCTCT CATGCCTTAT GCAAACCTTT 000640
000641 CCTCAGAGGT GACCCTAGAA GAAGGGACCC TTTGTGATGG AAAAGGTCTT CATTTGGGGC ATAACCTGTG CCAACAGAAA 000720
000721 GGTACTTTCT
[back to top]

Predicted Small Protein

Name NONHSAT077507_smProtein_569:676
Length 36
Molecular weight 3994.7525
Aromaticity 0.114285714286
Instability index 57.7228571429
Isoelectric point 9.68426513672
Runs 6
Runs residual 0.00968523002421
Runs probability 0.0366101395512
Amino acid sequence MLLLIFFSLSSSVAFCSHALCKPFLRGDPRRRDPL
Secondary structure LEEEHHHLLLLHHHHHHHHHLLLLLLLLLLLLLLL
PRMN HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
PiMo i??????????????????????????????????