NONHSAT077683
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077683 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
689 nt |
Genomic location |
chr2-:239133193..239140226 |
Exon number |
3 |
Exons |
239133193..239133514,239136325..239136439,239139975..239140226 |
Genome context |
|
Sequence |
000001 GTTAAGCAGC TTTGCGGTGG CGGAGGCTGG GCTGCCGTCT CTCCGACATC CCGGGACGGA GGAAGAGATG AAGGCTCTGC 000080
000081 AGCCCCCGCC GCCCGATTTA CGCTTGAGAA AGCGAAGGCG AGAGAGGTCG TCCAGCCCCT GGGGGCCCAG CCCTAGAGAg 000160 000161 cggggcgcgg gctgcggggc ccggcggccT GGACGGCGGA GCGTTGAAAG CTCCCCCAGG GATAGGAAGT GCAGCCGAAA 000240 000241 TCAACGATTG AGGGTCTGAG CACCTCCCTC ATGCAGACAG AGCCCCGGCT CCCATGTTCA CCATGCTGAG AAAGACCTGC 000320 000321 GGGGGACAGC AGGAGGACAG CCGGGGAATG GGCCCGCACT TGCCCAGGAT ACTGTGTTTT ACCCCAGCCG CCCACCTGGA 000400 000401 GAGCCTCCGA GGGGTCGCGG GCGCTCCTCC GGGGCCTGCC GGCATCTGAA GCAGAGGAGC AGAGGCCTAG ACCTCCCTTC 000480 000481 GCCCCCAACA CCTGGCGACG GACATTTGCC GGCTCTCAGC AGCGATGCGG gaattttaca ttgcgcgtct ggatatacac 000560 000561 ccaccacctg agtgtgccat tcacatgtta ctggactttg tcacatctag ttaatcctcc ctgctttgat ccgttttatt 000640 000641 ttttatgcat ttccaagtaa attatagacc tcaggcggct tccctaaca |
Predicted Small Protein
Name | NONHSAT077683_smProtein_293:448 |
Length | 52 |
Molecular weight | 5332.1958 |
Aromaticity | 0.0392156862745 |
Instability index | 55.2921568627 |
Isoelectric point | 8.93927001953 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.0190021954728 |
Amino acid sequence | MFTMLRKTCGGQQEDSRGMGPHLPRILCFTPAAHLESLRGVAGAPPGPAGI |
Secondary structure | LEEELLLLLLLLLLLLLLLLLLLLLEEEELLHHHHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |