NONHSAT077792
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT077792 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1531 nt |
Genomic location |
chr2-:240176886..240178428 |
Exon number |
2 |
Exons |
240176886..240176992,240177005..240178428 |
Genome context |
|
Sequence |
000001 AGCTTGATTT ATTCATCCAG TCATCTGCCC ATCCAGTCCC TTCTGCTGCT GAACTAGTCA TTGCTTCAGG GTCATGGACA 000080
000081 CAAAAACAGA CAAGGGTATG CCCCTCTTAG GGGCAGACAC AGAACAGTAT CAGTGGAGCG ATCTGAGGAA GCCAGTGTTG 000160 000161 GCAGGGAGCC TTCTAGATGG CCAACACCTT CTATGAAAGA GGAGGATGCT GCTGGGGTGA AGTCCTGGCC TTCTGGGAGG 000240 000241 GGCTGGAACC CGCCTCGGCG CTGGGTCAGT GCTCTGGATG GCAGCCTGGC CCCGACCAGC CTGTCCTTTC CCCCATGTGT 000320 000321 TGTTCTGAAT CTCTTTCCCC TGCGACAGAA TTCACAGAAA AAGCAAACCT AATTTTTTCC TTAGTCAAAA CTATTAAAAA 000400 000401 AGAAAAATCC CACACTTAAA GCCAGACCTC TGCAGAAGTA AATTTGGGAA TTCATTCTTG GATTTGTTTC TCTCCTGCCT 000480 000481 TAAAAGAGAA AGAAGCCTCC TAGAAGGAGC CCCACTGAAC TTGTTTGCTG TTTTCTTCAG TGAACCGCTT TCTGTGGCTC 000560 000561 TGCCTCTCTG AGAATGTTTC AAACTCTGAA ACGCAGCTGG AACACACTTG AGATGCTCCA CACAGACTAC AAAGTGATGG 000640 000641 CATGGACTGT GCAGAACAGA TGCTGTTTGC ATTAAAATAA AAGACAAACA TAATATTTGC ATTAATCGAG AACCTTTGCA 000720 000721 GGAGTATTTG CATAGAGTGG TTTATCCTTT TCCAAGAGCT GGTTACTCTT AACTAATTTC TGAGTGTAGA AAGGATAAGC 000800 000801 AATCTTTTGC TGATTATTTC TCACAAAGAA TTGCTTTCGC CCAAGTGTGT AGCTGTTTCC AAAGACGGGC TCTCCGACAT 000880 000881 GCACGTGTGA TGTTGAGTGC AGCACAGGAA GAATGGCCCA TGTGCCTGGC AGTGATTGCT GTCAGTCATG CTCTTGGGAG 000960 000961 CTTTTTGTGT TTCAGAGTAG GATTGCTGAG CTCGTACCCT GCTTTTAGTG GTACTGAACT TTGTTTCAGC AGAGTTGTGC 001040 001041 AGAGTTACTC ACACTAGACC ATATTTCAGT GGCCTCCTCT TCCTCCTTAT AATGAGAAGA AGCCAAGGCT GTGGCATGTT 001120 001121 GGCGTGTCAA GTGTTTTGGT GCCTGTGCGT ACAATTTCAG GGACAGCTGT ACTTAATTCT TATTTCATTA GTGAAGGCTG 001200 001201 TGTAAGAATA AAGACAAAGG ACTCAGAGCA AAGAAAAAAT GACGGTCTCT CAAAGAGAAG TAGAGCCCGG AGATGCAGGT 001280 001281 CATAAACCCT GCATAATTGG CTCTGAGTTT CTTAGCTGTC AAAGGAAAAA GGGAAGCCCT TTAATTTTAA GGTCTATGTT 001360 001361 GTTCTTAAGA GGAAACCAAC CAGGTGTTTT AAACAGTGAC TTTGAAACAC ACACACACAC ACACAGTGAG AAAACAAGAT 001440 001441 TACACATAGT CTCGGTATCT GTATGAACCT TTGTATTAAT TGAATATTCA GTAGTTATTA ATGTGTACTT ACATGATTTA 001520 001521 CTAGTGTTTT T |
Predicted Small Protein
Name | NONHSAT077792_smProtein_176:418 |
Length | 81 |
Molecular weight | 8727.8656 |
Aromaticity | 0.1 |
Instability index | 47.645125 |
Isoelectric point | 4.94415283203 |
Runs | 9 |
Runs residual | 0.0263157894737 |
Runs probability | 0.0419733458948 |
Amino acid sequence | MANTFYERGGCCWGEVLAFWEGLEPASALGQCSGWQPGPDQPVLSPMCCSESLSPATEFT EKANLIFSLVKTIKKEKSHT |
Secondary structure | LLLEELLLLLLLHHHHHHHHHLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHH HHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |