NONHSAT077834

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT077834

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2460 nt

Genomic location

chr2-:241503433..241505892

Exon number

1

Exons

241503433..241505892

Genome context

Sequence
000001 CTCTAACCCT GGCAGAGGAG CCTGGACGTC GCGACTGTCA GCCCTGGCTT TCTCCCACAG GAGTTTTCAT ACTCCAGCTT 000080
000081 TTTGGTGATC AGCGCAGTGA AGTGGCTGCG CGGCATCTGC ACCCCAGCCT TCCCCTGATG CACCCGAGGG AGGGGTTCCT 000160
000161 GGCTTCACCC ACTAGGAGGT GGGTGTGGGC ATGGAGCGTT TTAGCAGGCT GGGGAGGGCA GCAAAGCTTC CAGGAAGAAG 000240
000241 CAGTGTTCAG ACAGGGCCGC GCCCAACCCC GACAGAGGAC CAGGGAGCTA CCAGTTCTCA GATGGAGCTG GTGGGCTAAA 000320
000321 AAGGTCTGAT GTGACCCACA GGTGTCCTTC AACCTGGCCG GGGCCCTGCT GCCCTTGTCC CCTTGTCACC AGGGCCAGGT 000400
000401 CAGCAGGTAA AGGGTGTGCC CTGCCCTGAG GCAAGGGCAG CCGAGGTTTT CATCAGGGTG TTGTGAGCAG GGCTGAGCCG 000480
000481 CGGGGGAAAC CGCAGACCCA GGTCCTCCCT CCTCTCCAAG CCACTGTTCC TCACCCACTA GTGGCGACCG GCGGCTGCTT 000560
000561 CCTTCCGGGT TGATGAAAAG GTTGCATGAG TCATGAGGAG CTTATCTAGA GAGGCCAGCG GCAGGCAAGC CCTCCACAGA 000640
000641 GATGGGGACT GCCCTGGGCA CCAGCTTGTG ATGGGGGCCG CGGTCCACAG CGATGGGTGG TGCCGGCTGG TGACACGGCA 000720
000721 TAGAGGGGCA GCGACCAACA AGGTGTGGCC TATGCTTGAG GCccaggtac acaaggcgtg gggagggaga aggcccttct 000800
000801 cactaccacc cccacgcttg gctgacaaaa cccgtgcttc ccatcccccc agctttgggc tctgccgcat cagagatgtt 000880
000881 cggtccccag gtgggatgct tttgcttagg aacacaatcg ggtctcactg GGAGGGTGGC TCAGACACGG CCCAGCCACG 000960
000961 GAAGCATGAG ACAACACAGG GCTGGCTCTG GCAGGTGGGC ATGAGGCTTT GTGAGGCTTG GGGGCCAGGA AGAGTGGTGC 001040
001041 CTCCTACTTC TCTCTGGTGG TGCAGTACAG GTAACGGAGG CCACAGCACC TGTGTGGGCA GCCATGCAGG GCCTGGGGcc 001120
001121 ttaaaaatga aggatcgagt catgccacca ggtgaaggcc ataagcagct taggcactgg ctgagggtag aacatggaac 001200
001201 gagtattgga aaaggcagat aagcaccaac cacagtattt tactcattga cgcatacaga atgtaaatac gcgtagttgt 001280
001281 atatattaac caatgactac gttatctgtg attcacatgt attacacaca ttttcctttt ctttccccac tcCTATTTAA 001360
001361 GGAGTGTTGA TTCTAGGATA GTCTTTAGGC CACAGGATGT CCAGGAGAGG TGGTGTCTGA ACTAGAGAAG GAATCAACAT 001440
001441 GCTTGGATGC CTCCAGTGGT GGCTTATGGG GTTCCACCCT CACACGGCGG GAGAGGCAGC ACCTTGTTGG CTTGACAGTA 001520
001521 GCTATGTGAC CTTAAGTTGG GGTGCAATGT TGGTGAAACA GAGATCAAAG TAGGAGAGGG GTGCAGATGC TGGAGGCCTC 001600
001601 CCGGGTTCCC TCACCAGGCC GTCTGTCAGC ACAGCCTCCT TCTCCCCTGC CTGTCACAGG AGGGGCTTCC CATGTTCGGT 001680
001681 GCCCAGATGA GACCAGTGAG AGGTCTGGGA GGTGGGAGGA AGGAGATGTA CTGTGGCTTC AGCAGCTGGT GGGCAGGAGG 001760
001761 CTCTGCTGGC AGCTCCAGGT GCCCTCCACA GCCAGGACAT CAGGCAGTGG GGATCTGGGT GGCAGGTCCC TGTGACTCCC 001840
001841 CTATGTCTCC TCTCCTGTCC TTGGCTCCCC AGCCTTCTTC TCCCTGCATT CAGTTTCTTT CTGCCCAGTT CCTTAAGTGG 001920
001921 TTTAGATTTT CCTGACCAAG GCTTGTTTAA TAAGCTGAGC TGACCAGAGG GAGAGGACGG AGCAGATGGT GGTGCAGGGG 002000
002001 TCCATGTGGT CTGATGCGCA GACCCTTGCC CCACCAGCAA GAGGGGACAG AGACCCTCTG GAGCTGCATT TCCGGAAGAT 002080
002081 GGGGCTTAAC TGGGAAAAAT GAAAACTCAG TGTGGAGGCG AGTGCACTGG GCGGCCGTGG TGCCGTGGGA CCATGGACCT 002160
002161 CAGAGGGCAC TGGTGGCAGG ACCGCAGAGC GGGCCCTTCA GGCCACTTCA GGGCCACTGA GGTGGAGGAT TCTCTTGTGA 002240
002241 AGAAAGCAGT AGGAAGGATG GAAAACCATA CTTCCTAGAC AGGCATCTGG AGCAGTTTCA GTTTTGATTG CTGTTATTAC 002320
002321 TACTGATAAC TGAGCAAAAG TGGTGATGAT GCTTGAGAGA AATTTCTGCA ACCCACAGTC AGCAATTATA TGTACAGCCA 002400
002401 AGTACAGCGT GTGCTCATTT CTCCCTCGAT TTTTGAATCT GCAGTTTACC AAAGCTGCCA
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Predicted Small Protein

Name NONHSAT077834_smProtein_1586:1834
Length 83
Molecular weight 8808.7897
Aromaticity 0.0365853658537
Instability index 92.0536585366
Isoelectric point 7.86175537109
Runs 14
Runs residual 0.034830007391
Runs probability 0.0433416609888
Amino acid sequence MLEASRVPSPGRLSAQPPSPLPVTGGASHVRCPDETSERSGRWEEGDVLWLQQLVGRRLC
WQLQVPSTARTSGSGDLGGRSL
Secondary structure LLEEEELLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLEEELLEEEHHHHHLLEEE
EEEELLLLLEEELLLLLLLLLL
PRMN -
PiMo -