NONHSAT077901
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077901 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
840 nt |
Genomic location |
chr2-:242174600..242176186 |
Exon number |
3 |
Exons |
242174600..242174670,242174905..242175009,242175523..242176186 |
Genome context |
|
Sequence |
000001 AGTTCACAGT ACAGAGCCAG TTGTCCAGGA GAATGGGGAC GAAGCTGGGG AGGGGAGAGA GGCTAAAGAT TGTGACCCCG 000080
000081 GCTCTCCAAG GAGGTGTGAC ATCATCATCA TCTCTGGCCG GAAAGAAAAG TGTGAGGCTG CCAAGGAAGC TCTGGAGGTA 000160 000161 TGTGTCCATG TGCCCCCCTC CACCCCCCGC CAAGGCCCAG TCAGCAGGCA CCTGGGGAGA CGCGTGGCCT GGATGGGATG 000240 000241 GACGGTTGCC CAAGCGGCAG TGGCAGTGGA GGTAGCCCTC TTGCTCCTAC CGTGTGCGCA CGGGCTGTGC TTCTCGGCTG 000320 000321 GACACAGAGT TTGGGGAGGC CACTTCCCTT CACCAAGGCT CGGGGTTCTA TAGCCCCTTT CTGGGACAGC TGCATGGGAT 000400 000401 CCGGCCTCTC AGGCCCACGG TGGGTGCGGG GGCTGTGGAA GGGTCTCAGC TGCAGGGGGA TGAATGTGAC CTCCAGTTGC 000480 000481 AACGTCTCCC CCCGCGTGAG TGGGGTTATC AGGCCTAGCT CACCTTGTGT GCAGTCAGtg tcgagtgcca cctgcgtact 000560 000561 ggatgctgct ctcagtgctg cggtgccaca gcacacaaaa atagttctca cgttgccgtg gagagacaag cagtcaacgc 000640 000641 agatatatcc tgtggcaagt gatgGCATTG GTTCCTGTCA CCATTGAAGT AGAGGTGCCC TTTGACCTTC ACCGTTACGT 000720 000721 TATTGGGCAG AAAGGAAGTG GGATCCGCAA GATGATGGAT GAGTTTGAGG TGAACATACA TGTCCCGGCA CCTGAGCTGC 000800 000801 AGTCTGACAT CATCGCCATC ACGGGCCTCG CTGCAAATTT |
Predicted Small Protein
Name | NONHSAT077901_smProtein_32:274 |
Length | 81 |
Molecular weight | 8869.2388 |
Aromaticity | 0.0875 |
Instability index | 43.18375 |
Isoelectric point | 11.5809936523 |
Runs | 12 |
Runs residual | 0.0111842105263 |
Runs probability | 0.0393260907967 |
Amino acid sequence | MGTKLGRGERLKIVTPALQGGVTSSSSLAGKKSVRLPRKLWRYVSMCPPPPPAKAQSAGT WGDAWPGWDGRLPKRQWQWR |
Secondary structure | LLLLLLLLLEEEEEELLLLLLLLLLHHHLLLEEEELLHHHEEEEELLLLLLHHHLLLLLL LLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |