NONHSAT077903
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077903 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1070 nt |
Genomic location |
chr2-:242187664..242190411 |
Exon number |
3 |
Exons |
242187664..242187763,242189256..242189395,242189582..242190411 |
Genome context |
|
Sequence |
000001 gaccctgtct caaaaCACAT ATATATGGAA GTACAGTAGT GTAAATCTAA CATTAATTTC TGGTTTCTGC CCCCGAGAAA 000080
000081 TTGCAGAATG TAGCTTAGTC AGTCATGTCT GTTCTGTTTT CTTCTCATGC AGTTCCTAAC TCTTGTCTTC TTTCGTAATC 000160 000161 TAAAAAAACC TGCTGCCCAG CTCCCATGTC CTCTGCTTCT CTTGTCTTGT GTTGCTTCAC CTGGCACAGC TGCATGTCCA 000240 000241 TGTTCCCCCC TCAGTGCATC GCCTCGTTGC TGCCTCTGCG TGTGCATGTG TTTGGGATGG ACGCACAAAA AGCCCTCCTC 000320 000321 GTGGTCCTTC CAGCAAGCTG GGCTTCCCTT TACTGCACAG TGGGCAAGAT TCCTGCCTTG TTTCCTGATG ATACGGCTTC 000400 000401 TCCAGAGTTT GGGGGGCCTG GAACTCTTAA CTTGGGGGTA CTGGGTTCTA TCCAGAGAGG TTGACAGCAG GAGGGTTTGC 000480 000481 AACAGCACTT GTCTTGCAGA CACAGTGAAG TGCTCAGTGT GAATCTGAGC CAACAGTAGA TGGGGTCTCT GGGCAGCAGC 000560 000561 ATGGGCCCCA CAAGGCTCTT AGGCGTCAGT GAGTGCTTTT GTGTGGAGTT AATGTGTGTG GTTTTTTTAA CTTGAGAATa 000640 000641 gtagttccca aacttactgc acattagaaa cacctggaat ccttcaacta ttctgaagcc ctggccaata ccccagacga 000720 000721 gctaaatccc agactgagtg gccccaaccg tcagttattt gaaggtctcg gggcatttcc agcttctggt ccaggctgag 000800 000801 agccTGTCCT CCAGAACCCT TGTGATCCAG TAAACAGAAT CAAAGACCAG TACAAGGTGT CCGTGCGCAT CCCTCCTGAC 000880 000881 AGTGAGAAGA GCAATTTGAT CCGCATCGAG GGGGACCCAC AGGGCGTGCA GCAGGCCAAG CGAGAGCTGC TGGAGCTTGC 000960 000961 ATCTCGCATG GAAAATGAGC GTACCAAGGA TCTAATCATT GAGCAAAGAT TTCATCGCAC AATCATTGGG CAGAAGGGTG 001040 001041 AACGGATCCG TGAAATTCGT GACAAATTCC |
Predicted Small Protein
Name | NONHSAT077903_smProtein_185:463 |
Length | 93 |
Molecular weight | 9727.4192 |
Aromaticity | 0.0869565217391 |
Instability index | 50.1217391304 |
Isoelectric point | 6.67779541016 |
Runs | 17 |
Runs residual | 0.0495777291211 |
Runs probability | 0.0439280110561 |
Amino acid sequence | MSSASLVLCCFTWHSCMSMFPPQCIASLLPLRVHVFGMDAQKALLVVLPASWASLYCTVG KIPALFPDDTASPEFGGPGTLNLGVLGSIQRG |
Secondary structure | LLLLEEEEEEELLLHHHLLLLHHHHHHHLLLEEEEELHHHHHHHHHHLLLLHHHHHLLLL LLLLLLLLLLLLLLLLLLLEELLLEEEEEELL |
PRMN | - |
PiMo | - |