NONHSAT077960
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077960 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
890 nt |
Genomic location |
chr2-:242624531..242626196 |
Exon number |
2 |
Exons |
242624531..242625292,242626069..242626196 |
Genome context |
|
Sequence |
000001 GGCGGCCCGG CGCGGGGCTC TCATAGTGCT GGAGGGCGTG GACCGCGCCG GGAAGAGCAC GCAGAGCCGC AAGCTGGTGG 000080
000081 AAGCGCTGTG CGCCGCGGGC CACCGCGCCG AACTGCTCCG GTTCCCGGAA AGATCAACTG AAATCGGCAA ACTTCTGAGT 000160 000161 TCCTACTTGC AAAAGAAAAG TGACGTGGAG GATCACTCGG TGCACCTGCT TTTTTCTGCA AATCGCTGGG AACAAGTGTA 000240 000241 AAAACCATTG CACACTGCTC CCTCTGCCCT TGCCACTTTC CTTCCTCCTG AGATTCAGTG AACGCAGCAC TCGATTCTGA 000320 000321 ATGACAGTGA CAGTAGTGCT GGGCCTGATG TTCTTCTGTT TAGCAGTCCT GTGGGCAGAG GTGGTGAAGC GCCCTAGTTC 000400 000401 CCAAAGGGCG CTAATGAATG CTGTTTCGTC CTCCTGCTCC CCACACCCCA TAACTAATAG ACTTCAGTTT TTCGGGtttt 000480 000481 tttagacgga gttccgctct gtcgccaggc agaggtgtga tctcggctca ctgcaacctc cgcctcccag gttcaagcga 000560 000561 ttctcctgcg tcagcctccc gagtagctgg gactacaggc gcgccccagc atgctcagct aatttttgca attttaattt 000640 000641 actttatttt taaatttaat ttttgtattt ttagtagaga cagggtttca ccatgttggc caggatggtc tctcttgacc 000720 000721 ttgtgatcca ctcgcctcgg cctcccaaag ttctgggatt acgcaggtgt gagccaccgt acctggccCt ttttttttta 000800 000801 tttttaagac aaggtattgc tctgtggccc aggctggagt gcagtggcac ccgatcatgg ctcactgcag cctcaacttc 000880 000881 ctaggctcaa |
Predicted Small Protein
Name | NONHSAT077960_smProtein_692:883 |
Length | 64 |
Molecular weight | 7140.4731 |
Aromaticity | 0.0952380952381 |
Instability index | 62.4968253968 |
Isoelectric point | 10.7258911133 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0324932775914 |
Amino acid sequence | MLARMVSLDLVIHSPRPPKVLGLRRCEPPYLALFFLFLRQGIALWPRLECSGTRSWLTAA STS |
Secondary structure | LLEEEEEELEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLEELL LLL |
PRMN | - |
PiMo | - |