NONHSAT078104
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078104 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
641 nt |
Genomic location |
chr20-:1349622..1356247 |
Exon number |
4 |
Exons |
1349622..1349683,1350416..1350716,1352720..1352884,1356135..1356247 |
Genome context |
|
Sequence |
000001 GGATGCTTGA AGATGGAAAG AAATTTGATT CCTCCCGGGA CAGAAACAAG CCCTTTAAGT TTATGCTAGG CAAGCAGGAG 000080
000081 GTGATCCGAG GCTGGGAAGA AGGGGTTGCC CAGATGAGTG TGGGTCAGAG AGCCAAACTG ACTATATCTC CAGATTATGC 000160 000161 CTATGGTGCC ACTGGGCACC CAGGCATCAT CCCACCACAT GCCACTCTCG TCTTCGATGT GGAGCTTCTA AAACTGGAAT 000240 000241 GACAGGAATG GCCTCCTCCC TTAGCTCCCT GTTCTTGGAT CTGCCATGGA GGGATCTGGT GCCTCCAGAC ATGTGCACAT 000320 000321 GAATCCATAT GGAGCTTTTC CTGATGTTCC ACTCCACTTT GTATAGACAT CTGCCCTGAC TGAATGTGTT CTGTCACTCA 000400 000401 GCTTTGCTTC CGACACCTCT GTTTCCTCTT CCCCTTTCTC CTCGTATGTG TGTTTACCTA AACTATATGC CATAAACCTC 000480 000481 AAGTTATTCA TTTTATTTTG TTTTCATTTT GGGGTGAAGA TTCAGTTTCA GTCTTTTGGA TATAGGTTTC CAATTAAGTA 000560 000561 CATGGTCAAG TATTAACAGC ACCATTTATG AGTCTCAAGT TTTATTATTG CAATAAAAGT GCTTTATGCC GGCTTTTCTC 000640 000641 A |
Predicted Small Protein
Name | NONHSAT078104_smProtein_2:241 |
Length | 80 |
Molecular weight | 8847.0789 |
Aromaticity | 0.0886075949367 |
Instability index | 40.1088607595 |
Isoelectric point | 6.72979736328 |
Runs | 13 |
Runs residual | 0.0242760534073 |
Runs probability | 0.0216800510918 |
Amino acid sequence | MLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHP GIIPPHATLVFDVELLKLE |
Secondary structure | LLLLLLLLLLLLLLLLLEEEEELLLEEEELHHHLLEEEELLLEEEEEELLLLLLLLLLLL LLLLLLLEEEEEEEEEELL |
PRMN | - |
PiMo | - |