NONHSAT078229

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT078229

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2152 nt

Genomic location

chr20-:3276140..3296737

Exon number

5

Exons

3276140..3277596,3278676..3278822,3285087..3285190,3295680..3295767,3296382..3296737

Genome context

Sequence
000001 TCCCTAAAAA CAGTTGTTTT TTTCTGAAGT GAAATACAGG TGGAGACTAA CACATCCCCT CTGCTTGTCA TAAGCTCATT 000080
000081 AGCTGGACCT CAGGTCCTAG TGAGAGAGCC CACCAAGGCC TTGGGCTCTG AGCCCAGGTG ACCAGCAGAC ATCTCAGGTG 000160
000161 TGTCAGGGCC TGAGAGCACT GGACATGGAC ATGGTGGAAG GACTGTCCAG CCAGTGTCCT GGAAATATTT GAACACAGTG 000240
000241 GGGAGACCTA GCAGGGTTTT CCCTTGAAGT AGTTGACTGA AAATCTGCAT TCCTTTTGGA CACAGGTGGA AGATAATGAA 000320
000321 GTAAAATTGT CTGAGAAAAC CCAGCAAGCA GTGAGGGGGG ATGAGTCTTT CCTGGGCACT TATCTAACAG GAGGAGAAGG 000400
000401 AGCATATCTT TATTCCAGCA ATCTACAGTC CTGGCCTGAG GAAGGGAATG TTCATTTCTT CTCTAGTGGC CTTCTGTTTT 000480
000481 CTCACTGTCG TCATAGAAGT ATCATCATTT CCAAGGATCA CATGAATTCC ATTTCCTTCT ATGATGGGGA TTCCACCAGT 000560
000561 ACTGTTGCTG CTCTTCTCAT AGACTTCAAA AGCTCATTGC TTCCTCACCT CCCAGTTCAT TTCCATGGAT CAAGCAATTT 000640
000641 TCTGATGATT GCCCTTTTCC CCAAATCGAA GATATACCAA GCATTTTACT CAGAGGTCTT CTCCCTCTGG AAACAGCAGG 000720
000721 ATAACTCAGG GATCTCTTTA AAAGTGATCC AGGAAGATGG ATTATCTGTG GAACAAAAGA GATTGTAAGT GGCTGCTTCA 000800
000801 GTATTTGTGC TTGCTTCCCT AGGCTTTGTG GGTGTGCTCT CTCTGCAGGA TGCCTCGCAT TATGTAACAC AGGGGTCTTG 000880
000881 GCTTCTGAAA GGGTCAACAC AGACATTTCA ATGCTGCCAA CTTGCAGGTA GCCGGTGCCC TTGGGGGAAT AGAAGGCAAG 000960
000961 AGAGggccat gtgcagtgcc tcacacttgt aatcccaaca ctttgggagg ctgaggcagg aggatgaatt gagcacaaga 001040
001041 attagagact agcctgcctg ggcaacatag tgagaccccg tccctacaaa aaataaaaaa ttagctgggt atggtggcac 001120
001121 atgcctgtag tctcagctag tcaggaggcc ggggtggaag ggttacttga gcccaggaat tcaaggttgc agtgagccgt 001200
001201 gaccatgcca ttgcacttca gcctgagtga tgaaacaaga ccctttctca aaaaaaaaaa cgaaaaaTGT CCCCACTGCC 001280
001281 AGGAGCCAGT GTGGCTGTGA GGGGCCACGT CTCACAGCCC TGACCCGGGC CAAGCATGGT GTTGGGCGCC GGGCCCGTCT 001360
001361 CACCTGTCTT GGGGGGCGCC cagtgtctta ctctgtcacc ccgggtagag tgcagtggtg cggtcctggc tcactgcagc 001440
001441 cttgacctcc taggctcagg ttatcctccc gcttagcagg tgggactaca gAGGTTGCAG AACTTGAAGC TAATTTACCT 001520
001521 TGTACATGTA AAGTGCATTT TCCTGATCCA AACAAGCTTC ACTGTTCTCA GCTAACAGTA ACTCCAGATG AGGGTTACTA 001600
001601 CCAGGGTGGA AAATTTCAGC TTGAAACCGA AAGTTCCCGA TGTGTACAAC ATGGTGCCTC CCAAAGTGAA ATGCCTGACC 001680
001681 AAGATCTGGC ACCCCAACAT CACAGAGACA GGGGAAATAT GTCTGAGTTT ACTGAGAGAA CATTCAATTG ACGGCACTGG 001760
001761 CTGGGCTCCC ATGAGAACAT TAAAGGATGT CGTTTGGGGA TTAAACTCTT TGTTTACTGA TTTTTGAATT TTGATGATCC 001840
001841 ACTGAATATT GAAGCTGCAG AACATCATTT GCAGGACAAG GAGGACTTCC AGAATAAAGT GGACAACTAC ATCACGCGTT 001920
001921 ATGCCAGATA ATAAAAGGGG ACGGTTGCAG GCCCATGGAC TGTGTTACAG TTTGTCTCTA ATGTGAAACA GCAGGAGGTA 002000
002001 GCCCCACCTC CCATCCTCAC GCTCCCTCTC AGTCCCCTGG ATTGCCCCAG TCCTGTGACC ATGTTGCCCT GAAGAAGACC 002080
002081 ATCTTCGTGA CTGCTCATTG TAGATGGGGA ATTCAACATA AATACAGCAA GAAAATGTGT TTGGGCTTCT TT
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Predicted Small Protein

Name NONHSAT078229_smProtein_521:787
Length 89
Molecular weight 9913.2102
Aromaticity 0.125
Instability index 47.0320454545
Isoelectric point 6.23822021484
Runs 15
Runs residual 0.0390909090909
Runs probability 0.0381381381381
Amino acid sequence MNSISFYDGDSTSTVAALLIDFKSSLLPHLPVHFHGSSNFLMIALFPKSKIYQAFYSEVF
SLWKQQDNSGISLKVIQEDGLSVEQKRL
Secondary structure LLLEEEELLLLHHHHHHHHHHHHHHLLLLLLEEEELLHHHHHHHHLLLLHHHHHHHHHHH
HHHHHHLLLLLEEEEEEELLLEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiii
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