NONHSAT078240

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT078240

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2358 nt

Genomic location

chr20-:3648617..3651272

Exon number

2

Exons

3648617..3649647,3649946..3651272

Genome context

Sequence
000001 TTTCGGCCCT TTGCCACTTC CTCTGCACAA ATCACCTCTG TCACCCCCTT GAAGTTCCCA AAtgctgggc ccagcacatc 000080
000081 ttttcactcc ataccactgg tcagctgcgg tgctggctgc ccctgtgcca gggccctgcc ttaacccagt tctctgtgac 000160
000161 ctgggtggtg gcggagtggg gagtcacata atactaagca tggctgtcct aggactcacc ctgcaccagg gccctaggca 000240
000241 gggcagGCAC TCTGTGGCCA TGTCTGACAT AGCCTGGTCT TGGGAGTGCT CCGGGCAAGC CAAGGGAGAT GGCATGATTT 000320
000321 GGGCCAGAGA TGGGGGCAGA GGGCATAACA GACAGGGGCA GGGCACCACC TGGGCCCCGG GTGGCAGCTA AGAGGACCCT 000400
000401 GACAAAGCGA GTTGTGATTG AGGGTCTGTG GGCAGAGGAG CAAGGTGGCC AGAGCCTGGC GTGTCAGCAC GGAGGGGGCG 000480
000481 CTGCAGAGGG TGGCGGCTGC TTCTCATCCC CAGGCGGGAG TCTCAGGGCA GGGGAGAATG TTTTGAAGGA ACATCACAGG 000560
000561 AAATGACAAG GCCTTGGGGG ATGGGATGGG GACAGTCAAA GATGGCTTGG AATCATCAAG GGCAGCAGGG CACCCAGGGG 000640
000641 CAAGGAGAGC AGACATAGCT GCCGAAGGGG CGGACATCCA AGGTTCTTTG GAAGCTGAGC GATGCCAGCA TCTGGAGAGT 000720
000721 GCCAGGCTGC TGTCAGAGCC TGGAGGAAAT GTTAGGACTA GAGAGAGGAG GTGCCAGCCG AGGGCATGAG GCTCACTTGG 000800
000801 AGCCTGGATC CCAAGGCTCC CCTGAAGAGG GAGCAGGAAG GGAGCTGAGA GGGTGACTTG GAGCAGATGG GTGCCCCAAG 000880
000881 AAACTCAGTA AACGCAGAAC TCCCTGGGCT GGACACCATG CTGCGGGGAG GCAATAACCC ACTCAGGATC ACTGTGCCAA 000960
000961 CCTCCTGGAC TCTTATCACG TTGCTCAGCC CCAAAGATGG CCCACACAGG GACCACCCCC TGGGCGGCGT TCACCCCATG 001040
001041 GAGTTGGGCC CCACAGCCAC TGGACAGCCC TGGCCCCTGG GTGAGTGAGG CACCAGGGGG AGGTGGAGAG GGAAGGGAGA 001120
001121 AGGGAAGGGC TCATGCCTCC TGCCTCCTTC CAGATGGGCA GCACCCAGTC ACCTTGAGTC CCCTATGCCC CTCCCCAGCC 001200
001201 CCAGGGGCTC CTGCTGACCA TATTCACAAC ATTTACCCTC CACCATTTCT CCCAGACCCT GAGAACTCTC ATGAGCCCAG 001280
001281 CAGCCACCCT GAGAAGCCTC TGCCAGCAGT CTCGCCTGAC CCCCAAGCAG ATCAAGTCCA GATGCCAAGA TCCTGCCTCT 001360
001361 GGTGAGAGGT AGCTCCTAAA ATGAACAGAT TTAAAGACAG GTGGCCACTG ACAGCCACTC CAGGAACTTG AACTGCAGGG 001440
001441 GCAGAGCCAG TGAATCACCG GACCTCCAGC ACCTGCAGGC AGCTTGGAAG TTTCTTCCCC GAGTGGAGCT TCGACCCACC 001520
001521 CACTCCAGGA ACCCAGAGCC ACATTAGAAG TTCCTGAGGG CTGGAGAACA CTGCTGGGCA CACTCTCCAG CTCAATAAAC 001600
001601 CATCAGTCCC AGAAGCAAAG GTCACACAGC CCCTGACCTC CCTCACCAGT GGAGGCTGGG TAGTGCTGGC CATCCCAAAA 001680
001681 GGGCTCTGTC CTGGGAGTCT GGTGTGTCTC CTACATGCAA TTTCCACGGA CCCAGCTCTG TGGAGGGCAT GACTGCTGGC 001760
001761 CAGAAGCTAG TGGTCCTGGG GCCCTATGGT TCGACTGAGT CCACACTCCC CTGGAGCCTG GCTGGCCTCT GCAAACAAAC 001840
001841 ATAATTTTGG GGACCTTCCT TCCTGTTTCT TCCCACCCTG TCTTCTCCCC TAGGTGGTTC CTGAGCCCCC ACCCCCAATC 001920
001921 CCAGTGCTAC ACCTGAGGTT CTGGAGCTCA GAATCTGACA GCCTCTCCCC CATTCTGTGT GTGTCGGGGG GACAGAGGGA 002000
002001 ACCATTTAAG AAAAGATACC AAAGTAGAAG TCAAAAGAAA GACATGTTGG CTATAggcgt ggtggctcat gcctataatc 002080
002081 ccagcacttt gggaagccgg ggtaggagga tcaccagagg ccagcaggtc cacaccagcc tgggcaacac agcaagacac 002160
002161 cgcatctaca gaaaaatttt aaaattagct gggcgtggtg gtgtgtacct gtaggcctag ctgctcagga ggctgaagca 002240
002241 ggaggatcac ttgagcctga gttcaacact gcagtgagct atggtggcac cactgcactc cagcctgggt gacagagcaa 002320
002321 gaccctgtct ctaaaataaa TTTTAAAAAG ACATATTA
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Predicted Small Protein

Name NONHSAT078240_smProtein_329:565
Length 79
Molecular weight 8004.8942
Aromaticity 0.025641025641
Instability index 56.2858974359
Isoelectric point 9.29791259766
Runs 14
Runs residual 0.0458098811757
Runs probability 0.0494549171019
Amino acid sequence MGAEGITDRGRAPPGPRVAAKRTLTKRVVIEGLWAEEQGGQSLACQHGGGAAEGGGCFSS
PGGSLRAGENVLKEHHRK
Secondary structure LLLEEELLLLLLLLLLLHHHHEELLLLEEEEEEEEELLLLEEEEEELLLLLLLLLLEEEL
LLLLLLHHHHHHHHHHLL
PRMN -
PiMo -