NONHSAT078241
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078241 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
731 nt |
Genomic location |
chr20-:3650542..3651272 |
Exon number |
1 |
Exons |
3650542..3651272 |
Genome context |
|
Sequence |
000001 TTTCGGCCCT TTGCCACTTC CTCTGCACAA ATCACCTCTG TCACCCCCTT GAAGTTCCCA AATGCTGGGC CCAGCACATC 000080
000081 TTTTCACTCC ATACCACTGG TCAGCTGCGG TGCTGGCTGC CCCTGTGCCA GGGCCCTGCC TTAACCCAGT TCTCTGTGAC 000160 000161 CTGGGTGGTG GCGGAGTGGG GAGTCACATA ATACTAAGCA TGGCTGTCCT AGGACTCACC CTGCACCAGG GCCCTAGGCA 000240 000241 GGGCAGGCAC TCTGTGGCCA TGTCTGACAT AGCCTGGTCT TGGGAGTGCT CCGGGCAAGC CAAGGGAGAT GGCATGATTT 000320 000321 GGGCCAGAGA TGGGGGCAGA GGGCATAACA GACAGGGGCA GGGCACCACC TGGGCCCCGG GTGGCAGCTA AGAGGACCCT 000400 000401 GACAAAGCGA GTTGTGATTG AGGGTCTGTG GGCAGAGGAG CAAGGTGGCC AGAGCCTGGC GTGTCAGCAC GGAGGGGGCG 000480 000481 CTGCAGAGGG TGGCGGCTGC TTCTCATCCC CAGGCGGGAG TCTCAGGGCA GGGGAGAATG TTTTGAAGGA ACATCACAGG 000560 000561 AAATGACAAG GCCTTGGGGG ATGGGATGGG GACAGTCAAA GATGGCTTGG AATCATCAAG GGCAGCAGGG CACCCAGGGG 000640 000641 CAAGGAGAGC AGACATAGCT GCCGAAGGGG CGGACATCCA AGGTTCTTTG GAAGCTGAGC GATGCCAGCA TCTGGAGAGT 000720 000721 GCCAGGCTGC T |
Predicted Small Protein
Name | NONHSAT078241_smProtein_329:565 |
Length | 79 |
Molecular weight | 8004.8942 |
Aromaticity | 0.025641025641 |
Instability index | 56.2858974359 |
Isoelectric point | 9.29791259766 |
Runs | 14 |
Runs residual | 0.0458098811757 |
Runs probability | 0.0494549171019 |
Amino acid sequence | MGAEGITDRGRAPPGPRVAAKRTLTKRVVIEGLWAEEQGGQSLACQHGGGAAEGGGCFSS PGGSLRAGENVLKEHHRK |
Secondary structure | LLLEEELLLLLLLLLLLHHHHEELLLLEEEEEEEEELLLLEEEEEELLLLLLLLLLEEEL LLLLLLHHHHHHHHHHLL |
PRMN | - |
PiMo | - |