NONHSAT078331

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT078331

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1857 nt

Genomic location

chr20-:5428969..5433259

Exon number

2

Exons

5428969..5430509,5432944..5433259

Genome context

Sequence
000001 GGGCAACACT GAGCATTGAG TGAGCGAGAC TCCGTCTGCA ATCCCGGCAC CCCGGGAGGC CGAGGCGGGC AGAACACTCG 000080
000081 AGGTCAGGAG CTGGAGACCA GCCCGGTCAA CAGGGCGAAA CCCCGTCTCC TCCAAAAATA CAAAAACCAG TCAGGCGTGG 000160
000161 CGGCGCGTAC CTGCAATCCC AGGCACTCGT CAGGCCGAGG CAGGAGAACC ACGGGAGCCC GGGACAGGGA GGCTGCAGCG 000240
000241 AGCCGAGACC ACGGCAGTAC AGTCCAGCCT CAGCAACAGA GGGAGACGGA AGGGAGGGGG AGGGGGAGGG GAAGGGATGG 000320
000321 AGTTTCACCA TTTCATCCAG GCTGGTCTCG AGTTCCTGAC CCCAAGTGAT CTGCCCGCCT TGGCCTCCCA AAGTGCTGGG 000400
000401 ATTACAGGCG TGAGCCACCG TGCCCAGCCT AGCTCCTAAA ATTAAAGTTG ATTCCATGCT GATAATGTTG ATCGCAAGCT 000480
000481 TAGATAGAAG TGCAGGTGCA GAATAAAGAC AAGACTCATT CCTATACCTA CCCAGAGACA TCTGCATACT TGACTCTTCC 000560
000561 TTTACTCTCT TTTTATTTTC AAACATCCAA TTTGTCTTAT GTAAAATGTA GATTTACCAG GCAGCAGCTA GAGTCTCACA 000640
000641 GGAATGTAGC CATTCGCCTT ACCACCTGTC TGCCCTTTTT CCTAAAAGCC TTTCCCCCAT TTAAGGAAAT GTGTAAATAC 000720
000721 TAAATCCCCT GAAACTCTCT TGAGAAAAAC AGCCACAGAT GTACCTGTGG CTTGTATTTT TCCCGGAAGC ACCCTCAAGC 000800
000801 TGACTTAATA AACCTCGATG ATTGAGATTT ATGCCTTGGT CATTCTATTC AGATGTCAGA AGGACCCATG GGAAGACTCA 000880
000881 GAGAGAAAGG TCTGTAGGAA GAGGCTAAGG AGCCCAATCT TCTCCCAGAA AATGGACGCT TCGGGTGGTC ATGAATTGTA 000960
000961 GGGCTATTGG TACTGGGGTG AGTAAAGAGG AAGAGAAAGA GAGCAAGGCC CCAAGGAGAA GGGGAAACAG GGAGGGAGGA 001040
001041 AGGGGCCATG CCCTGTCCTC CCCTCCTCCA GTGTCCCTGC CCCTCTCCAA CTTCAGAATT CCCATTGCTC CTTGAGAACT 001120
001121 CAGACACTAG CTTCCCCACC AAGGCCTCCT CCCTCTGCAT TCCCCCAGCC TGTCCATTCT CGGTCACACT GACTCCGAGT 001200
001201 CTGGTCAGCT GCCTGTATGC CTGTCTCACC CAGTTAACTT AAATTCCTTG GGGTCAGGAA CAATGCTTTC TTCTTATTTT 001280
001281 CCATGCCACA GCTCCAGTTA CTGTGACTGA CACACAGAAA TATTGGCTTG GAGTCGATTA TCTCAGGGAT GCAGCTCAAA 001360
001361 GTAAATGTGT CTTGTATAGA GTGGGCATAG GGATGCTTTA ATGAGGAACG AGCAAGTCCC AAGAGGAGCA AGGAAAACTT 001440
001441 GAGCTGCAAC CACTTTGCAT TTCAGATGAT GAATTAGAGC GGTTGTTATC GAATCTGCCA CCAGAGGGCG ATCCAGGTAA 001520
001521 AAAAGATCTT CGGGCTACTC TTCAGCCCGG TGACCTGATC TTCCCCCAAA CTCAGATCCT TGCTGCCTCC CAGAAACAGC 001600
001601 AGACACCTAA GTCCAATGTA GCTTGCCAGG ATCTCAGGGA ATGAAATTTT ATAGTTTGCT GGCATTTTCC TCAGGGGAGC 001680
001681 AGAGGCAAGA AAACAATCAA ATCCAAGTTT GCGCCACTGC ACACCAGCCT GGGCGACAAA GCAAGACTCC CGTCTCAAAA 001760
001761 AAAAAAAAAA AAGAAAAGAA AAGAAAAGAA AAGAAAAGAA AGAAAACAAT CAAATCCATG GTCTGCTGTT TACTGGATGA 001840
001841 AGAATAAGAC TGCCTAA
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Predicted Small Protein

Name NONHSAT078331_smProtein_1640:1846
Length 69
Molecular weight 7942.256
Aromaticity 0.0441176470588
Instability index 52.3266176471
Isoelectric point 10.0237426758
Runs 10
Runs residual 0.00655802861685
Runs probability 0.0471383147854
Amino acid sequence MKFYSLLAFSSGEQRQENNQIQVCATAHQPGRQSKTPVSKKKKKEKKRKEKKRKKTIKSM
VCCLLDEE
Secondary structure LEEEEEEELLLLLHHHHLLLEEEEEELLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHH
EEEELLLL
PRMN -
PiMo -