NONHSAT078521
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078521 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1569 nt |
Genomic location |
chr20-:6018020..6019573 |
Exon number |
1 |
Exons |
6018020..6019573 |
Genome context |
|
Sequence |
000001 AAAGCCTGAG GAGACTTGGA CCATTTTCCT AAGGGATGAA GCGGGAAACG TTTATTAACC AGAGCCAGAT TGAGACCTTA 000080
000081 ATAATAAAAA GATATGGGTC CAACCCATAG GTCACTCCAA ATGGCATCAA CACTAAACCA TAAATAAGCG TTAACAAAGT 000160 000161 GCAAAGTTCT AAATTTTCGC ATAGCTACTT CAAGTCCTCT CTTTTTTAAA CATTATTCTT ATGTGGCTCA CCCGTCACTA 000240 000241 ATGCTCAGTG TGCCTCTTGG GTGGCTCAGC AGTGGGAAGT CCACTTTCAG CCTAACTACT CCTAACAATG AAGCTGTTCT 000320 000321 CCAGAGAGCA AGAATAGCCA GCCACATGCC CCCTTCTCTG CTTTTTCATC CCCCTCCATC TGATTCAATG GCGGTGTCCC 000400 000401 TGGCTGCAGG CTTCAGTATG CTTCAAGCCA AGCGCAGCTC AGCTGCCAGT CTGAGAACAA CCAGGACCAG CAAGCCACAG 000480 000481 AGGGACACGC TGGTGCAGAA TGCCTGGCCA AGAGGCATGA GTTTTACTTA CAGCCTCCCA TTCTAATTTA ATGCAGCTCA 000560 000561 ACAGGCTGAG AATGGATAAT CTCACTGCAG TATTCCATAA TAGGCTTGGA TTAAAACCAG GGACAATGGG CAGCAATAGG 000640 000641 CCATAGGTTA AGCAGCAGCA ACTAGTCACC ACTGGACTGT CTTCTTCTCC CCTTCCCCAT ATCCCACATT CTCCTAAACA 000720 000721 TGATGTACGT GTAGCAACAG TCTTTTAAAG TCAGATGGTC AGACTAATTA TTTTTACAAT TTAAGTGTAA GTGATGTACA 000800 000801 TGAATGGACT CTGTGAATCG GAAAACTTAC GTAACAGCAG AGAATACGTA TGTTATATGG AACAACCTGA GTTGAAGGTA 000880 000881 CAATTTTTTT TCCAGCTCTT TTATTCCTTT AACTGCTTAA CAAAAGAAAG AGTCTCCAAA GTTTAAAAAA CCTTTGAAAA 000960 000961 ATATACAGCT TGATATTATT TACATAAAAT ATGAATCCAG GTTCCAATAT CAAACAAACA TTGCTATGTC AGAAACACAG 001040 001041 TGGAAGGCAG GAACGTAACT CACTGCCTTT TAGATGCAAA GACTAATAGA CACGTTCTCC TATCTCGACT ATCTTTGTTA 001120 001121 CCTGTTATCC TCAAACATAA ATTATTAGGC ACCTGAGAGG TTGGAAGACT ACCGAAAATG AACTTCATAC CTTCTGTATG 001200 001201 ATTATTATCT TAAAAAGTTA CCGCATTTTT AATCTCTTTT ATAACTTTAC TTCATCTACA ACTAACTTCA CTTTCATTAT 001280 001281 CCCAAATGAT CAGGTATTAA TTACATGAAC TGTTAATGTA TACACAGACC TAAAAATCAA ACAAAAATGT ATTGCCCAGT 001360 001361 TGTGTAGGAT ATATATTTGA ACCCCATGAC ATTTCCTAGT GCTTTGTGAG CAATCCAAAT TTCACTTAAA AGAGAGGTGT 001440 001441 CAATTCTGCC CATGCTCTGG ACTATGTTTT TAAAAAACAT ACAAAAAAGA CTGACAATAA TTGATCTCTT ATAAATTAAT 001520 001521 CAAGAAACCT AAGATTAAAA ATTCTAAATT ACAAAAAAAA AAAAAAAAA |
Predicted Small Protein
Name | NONHSAT078521_smProtein_35:109 |
Length | 25 |
Molecular weight | 2867.2828 |
Aromaticity | 0.0833333333333 |
Instability index | 71.975 |
Isoelectric point | 9.69390869141 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0170111287758 |
Amino acid sequence | MKRETFINQSQIETLIIKRYGSNP |
Secondary structure | LLEEEELLHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |