NONHSAT078545

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT078545

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1629 nt

Genomic location

chr20+:7328114..7349144

Exon number

3

Exons

7328114..7328323,7341268..7341452,7347927..7349144

Genome context

Sequence
000001 GAATTAGGCC AAGACACAGA AATATACTGC ATGCCAAAAT GTAAAGGTGA CATGAGTGAT CAAAAGAGAG GGAAAGTGAA 000080
000081 AGGTCAAGGG AGAAACTCTC AGCTTGTAGG TACAGAACCA TTTCCATGAG GTCAGCTACA TTCCAAAGTG GCTGCGGCAC 000160
000161 TGGATGGGAG CTGTTGGGAC ATGCTGCACA GCCCAAGACA GTCTTTGAAG ATGGCTGGAT GCATGACCTT GTCATATACG 000240
000241 TAAAACATCC ACAGACTAAC TGGAAAAGGA CTTCACCTCA GCCAAAGTGA GTGCATTGCA GAATAAGTGC AGAGAGCTTA 000320
000321 CCTTGGTTTT TAAAGATATT GCAATCCGTT TTAATTGGGG ATCTCATTGC AATGTGCTCC TATGTCTTGA GACAGGGCCT 000400
000401 TCAAGAGGAT CAATATTTCC AGGATGTTGG TATTAGCATC CATTGTTCGC TGGCTAGATC TTTTCCAACA GAGCATGTGA 000480
000481 CTCTCATCAT TACAGCAGAG GAATGCATTT ATCAAAGTTA AGGAAGTCGT TTGCCATTCG GATGGCCCAA GAAGCATAAA 000560
000561 TATTTATCAT TGAGCCTTGT GAGAACTCTC TATTATAAAA AGATTGGCTA ATTTCTTAAA ACTACTCCTT CAATAAGGAC 000640
000641 CCAGGTTATG TGCCATGGTA TCTGTAGCTT TCTGGCTGGG TCAGGGTGAC CCGCACACAA CCCTGGCAGG ACACCCTTGG 000720
000721 ACACAGTATT TGCATCCCTT TGGTGTGCCA AGGTATCAAG CATTCACAGT TCACATTGAA ACCACTAAAC GAAGAGCTGT 000800
000801 GCAAACAGGT CATCAGTTTC TCCAGAGGGG AATAATCTTA CAACTGTTAC GAAGGGTCAA AGGTAACTTT CATTTTGAGA 000880
000881 TGCTAATTAC TCCAAGAATT TGATGCAGGA GGCAGCTGGT TAAAATGAAT GAGTGCTGAA GCGTTGAAGG GGAAAATCAA 000960
000961 ATAGATGGTT ATAATAAAAG TGCAATATGC AACCTAATAA GTATGCAGAG AATAAGGGAC AATATTGTTA ATAAACATCT 001040
001041 ATTAGTCAAG ATGATCTTTG TAGAGCTGGG CTCTTTAATA TTATACCTGC TAATCACATG CAATTAAATT TAAATTTAAG 001120
001121 GTGGTTGAGA TTAGAAATTC AGGTCCTCAG CCACAGAGGC CACATACAAC ATGTTCAATA GCCACATGTG GCCATTGGCT 001200
001201 ACCATATTGG AGAGCCCAGA TATAGAACAG TTTCATTACT GCAGAAATTT CTATAGGACA GCAATGACCT GGAGTGTTTT 001280
001281 GCTATTGGAG GGGTTTTGGA CTTAGTGCTT TTATATAGGA AACATGATTT TTTTAAAGAA GCCATCCCAT GGAATGCTTC 001360
001361 TCTCATTCCA GTGCTGTAGT AAGGGTTGCC CTGAAATTTG GACCTAGAAA ATTCACTTAT CATAAACGAA AAAACTGTTA 001440
001441 CTACTATCAA TAATATTTTT GTCCTGGTGA ATATTTACAT TGTACCACAC ACTGTGCTAG TTGCTTTATA CATATTGTGT 001520
001521 CATTTAATTC TTACCTTAGA GACTAAGATC TATCTGTGAA TTACTTTGAG ATAAATCAGG TTAAGAGAAA AATAAAAACT 001600
001601 GACTTTAGAC CACAAAAAAA AAAAAAAAA
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Predicted Small Protein

Name NONHSAT078545_smProtein_125:289
Length 55
Molecular weight 6154.9272
Aromaticity 0.111111111111
Instability index 69.6333333333
Isoelectric point 9.03533935547
Runs 11
Runs residual 0.0410117434508
Runs probability 0.0336031218384
Amino acid sequence MRSATFQSGCGTGWELLGHAAQPKTVFEDGWMHDLVIYVKHPQTNWKRTSPQPK
Secondary structure LLEEEELLLLLLHHHHHHLLLLLLEEEELLEEEEEEEEEELLLLLLEELLLLLL
PRMN -
PiMo -