NONHSAT078550

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT078550

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1930 nt

Genomic location

chr20+:8000549..8008603

Exon number

7

Exons

8000549..8000751,8001038..8001908,8002706..8002802,8003028..8003096,8003204..8003414,8003918..8004099,8008308..8008603

Genome context

Sequence
000001 AAAACAGATG ACCCAACGTT GCCTAAGTTA GAACATGCAC CGCTGCTGCC CAGGCTCCAA TAAGGGCAGG GTTGGCGCGT 000080
000081 GTGGGCTTCT CTAAAGGGAA ACATGGCCAG TAATTTTAAA ATCCATCCCC TCTTCAATGA TAGCAAATAT AAAAGCAACG 000160
000161 GGCTGCAAGG TACACGTATG TTTAATGAAA AATGGAGGGA CGTGGTCACA TTAGATGAAT CTGTACCTTG GGACCACCAC 000240
000241 ACCGTTAATA TATAAGACTG GATTACAATT AAAGGATGAG GAAGCTTTCT CAAAGGGTGC TTTGTATGTG TTTACTAGTT 000320
000321 GTGCAAACCA TGAACCTCGG TAATGTGGTT AATAGACCAT GAAAAGGATG TGGTTTCTGC CCTCGGCTTA AAACAAAGAC 000400
000401 AGCAATAAGA CTAAAAGTAC TTCAGGGCAC ATGAGAGCAA ATTTCAATCA ATACTTATAG GAGAGGGAAG TTAATTTTGC 000480
000481 CTGAAGAGAA GATCTGGCCT GCATTATGCA TTAATTAGTA TTAGCTAAAA ACTATGTGGA CCTAGCCCTT ATCATTAAAA 000560
000561 TAAAACACTC AAGGGTTTAC AAACTATTGA AATTTAAGAA AATGTCTTTG CAATGAATGC TACTAAGACT CACTGTTATT 000640
000641 AAGTACATAC ATATCAATTC CATAAACTCA ATGGAAAACA TTTTACTGTG CTTGTAAAAA GAAGTGACTC ATAAACAGGA 000720
000721 ATTCTGTCAT TTTATCACTT TCATGATAGA ATGATGTGTA GAATTTGTTT TACAATGCTC CAGAAATAAA ATGTAGGGAA 000800
000801 TGGAAAGAAG ATAGGTGAAA GAAAAGTGGT GCAACATCAG TCAGTGTTGA AGCTAAGTTC ATTTTGCTAC TTTACCTACT 000880
000881 CATGCATATG TTGGAAAATT TACAAAATGA AAAGCTAAAA GGAGAGAGAG CATCTTCAGC ATGAAAGACA GCCATTACCA 000960
000961 AAGCATTTCC TATCTTTAAC AAAAACTGAA GTCTTAGCCT TCAGACTAAG GATGGTAGGA AGAAAGTAGC AAGGAAGTAT 001040
001041 GGGACTGACC TTGCCGTAAG GAGTCACAGA CCAGGCTGTC TCTCTTTTGG CCTGCTGCCA TCCGCGTAAG ACATGACTTA 001120
001121 CTCCTCCGTG CCTTCCACCA TGATTGTGAG GCTTCCCCAG CCATGAGGAA CTAATACCCA TCCCATAGAT GTACTTGGGA 001200
001201 TAGACAGCTT CTGGCACTCC TCCCAAGATC TCTCCCTCCT GGTTACAAAA ACCTGAGACT TCCATTTTGC TGGAAACTTC 001280
001281 TTTTCCTCTT GCACACTCAC TCTGCGACTC TGTGTGGAGA GCTCCATGTG ACAAGGGAGG TCTGCAGCCT AAGCAACTGA 001360
001361 GACCTCAGCC CAACAGCCCT CAAAGAACTG GATCTTCAAA CAACCACATG AGTGACCTAG AAGCAAATCT GTCACCAGTG 001440
001441 CTCTTGAGAC GGGCTGAAGT ATTTAATCAC CGGCACAAAA TGTCCCAGTG TTCTGTTCTC CTGCTGTGGA AATTTTAGAG 001520
001521 AAAAGATCAT GATCTAAGAG TCTGCAAGAC CAGAGCAGCC TGAATTGCTG AGCTGCCTGG TGGAGAATAG CAGCATTGGG 001600
001601 TGGTTCCCAG GATTCTTAAA AGGACTTTAC AAAGGCCTGG CCTAATCACT TAAGAGCTCT TAAGGAGTGA ATGGGCTCTT 001680
001681 CCTGAAAAAA GAGCTTCTGC TAACCCTGAA AAGCAAGCAA CAACCCTGTG AACTGCTATG GAGAGAGATG GCCTCTAACA 001760
001761 GCTGAGGACC TCAGTCCTAC AACCACAAGA AACTGATTTC TGCCAACAAC ATGAATGAAC TTGGAAAAGG CCCCTGAGCT 001840
001841 CCAGATGAGA ACACCCAGGT CAACTCAGGT CATGAGCAGA GAACCCTGTT ATATTCTCCT TGGCTTGTGA TCCATAAACA 001920
001921 ATGAGATTAT
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Predicted Small Protein

Name NONHSAT078550_smProtein_1814:1909
Length 32
Molecular weight 3606.2656
Aromaticity 0.0322580645161
Instability index 66.8387096774
Isoelectric point 7.95489501953
Runs 5
Runs residual 0.0399865591398
Runs probability 0.0246952835188
Amino acid sequence MNLEKAPELQMRTPRSTQVMSREPCYILLGL
Secondary structure LLLLLLHHHHLLLLLLLLLLLLLLLEEEELL
PRMN -
PiMo -