NONHSAT078769
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078769 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
632 nt |
Genomic location |
chr20-:17816007..17816804 |
Exon number |
2 |
Exons |
17816007..17816448,17816615..17816804 |
Genome context |
|
Sequence |
000001 ACCGTGTGCG GTCCCACTTC CCGGGGGGGT CACACATTGT CCCCACTACC ACCCCCGGCC TTATTAAAAT CACCCTTCCC 000080
000081 TCCCAATCAA GCTGAGCCAA CATCTCTGAC TGAGTCTGGA AAAATTCCTT TCTCCTTAAC TAGGCCAAAA AAAGGTTGAA 000160 000161 CATTTCCCAA AGGAACACTG AGGCACAAAG GCAAATGCCA GCAAACTGTG GATGTGGCCG GGGCGGGGGC GGGAAGGGCT 000240 000241 CTGCTTCCAG CCTGGTGGGT GCCTCAGTGC TTCTCAGGGA CTGGGCCCAG GTCTTTGTCT GGGAAGGGGC TCTCCATGCA 000320 000321 CCTGCCAGGC CCTCCAGCCA GGCCCCCTCA ACATCCCCCT GGCCTCCTTG AATGTTGTCC CGGCTCTGCC CCCTTTCATG 000400 000401 AGGAAAGCCT TGAATTTTCT CCTCACTCTT CTGGAAGTCA CTGGCTCCTT GGCTCAGGGT GTCCCCCACC CTGACCCCAT 000480 000481 CTCGCTCTGA CCGTCTGGTT GTCCTAAAGC ATGTTCACAG GGTTTCAGGC TGGCTCTGCC TTGGAGCTGC CATGTTCCAC 000560 000561 TGGGTCCTCC GATGAGTCAG CACAGATTCC CGCGGGCTGT TTCCAAACGT GAATCACTGT TGGAGTCCCT TT |
Predicted Small Protein
Name | NONHSAT078769_smProtein_194:370 |
Length | 59 |
Molecular weight | 5818.4997 |
Aromaticity | 0.0689655172414 |
Instability index | 57.5431034483 |
Isoelectric point | 8.93902587891 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.0454488101548 |
Amino acid sequence | MPANCGCGRGGGGKGSASSLVGASVLLRDWAQVFVWEGALHAPARPSSQAPSTSPWPP |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHLEEEEHHHHHHEEEEELLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |