NONHSAT078792
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT078792 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
740 nt |
Genomic location |
chr20+:17950700..17970874 |
Exon number |
3 |
Exons |
17950700..17951013,17968809..17968941,17970582..17970874 |
Genome context |
|
Sequence |
000001 CCAGACCCCG GGATCGGTGG AGGAAGATGC TTTGCTCTGT GGACCCGTGA GCAAGCATAA GCTGCCAAAC CAAGGTGAGG 000080
000081 ACAGACGAGT GCCACAAAAC TGGTTTCCTA TCTTCAATCC AGAGAGAAGT GATAAACCAA ATGCAAGTGA TCCTTCAGTT 000160 000161 CCTTTGAAAA TCCCCTTGCA AAGGAATGTG ATACCAAGTG TGACCCGAGT CCTTCAGCAG ACCATGACAA AACAACAGGT 000240 000241 TTTCTTGTTG GAGAGGTGGA AACAGCGGAT GATTCTGGAA CTGGGAGAAG ATGGCTTTAA AGAATACACT TCAAGGGCAA 000320 000321 GCTCTGTGTG ATTGATTGGA AGACATCAGA GAAACCAAAG CCTTTTATTC AAAGTACATT TGACAACCCA CTGCAAGTTG 000400 000401 TGGCATACAT GGGTGCCATG AACCATGATA CCAACTACAG CTTTCAGGTT CAATGTGGCT TAATTGTGGT GGCCTACAAA 000480 000481 GATGGATCAC CTGCCCACCC ACATTTCATG GATGCAGAGC TCTGTTCCCA GTACTGGACC AAGTGGCTTC TTCGACTAGA 000560 000561 AGAATATACG GAAAAGAAAA AGAACCAGAA TATTCAGAAA CCAGAATATT CAGAATAGGG AGCAAGTTGC TATTTGGGAA 000640 000641 CATTCAGCAC CTTCTCACAG TTTGGGAACA TATATTGCTG TTTACTCCAG TGTAAAAATG AGGTGCCACT GGATCTGAGT 000720 000721 GCTACACGAA CACAAGTAGA |
Predicted Small Protein
Name | NONHSAT078792_smProtein_452:694 |
Length | 81 |
Molecular weight | 9317.8021 |
Aromaticity | 0.125 |
Instability index | 59.93625 |
Isoelectric point | 9.01910400391 |
Runs | 13 |
Runs residual | 0.0236842105263 |
Runs probability | 0.0446373975786 |
Amino acid sequence | MWLNCGGLQRWITCPPTFHGCRALFPVLDQVASSTRRIYGKEKEPEYSETRIFRIGSKLL FGNIQHLLTVWEHILLFTPV |
Secondary structure | LEELLLLEEEEEELLLLLLLLLLLLLHHHHHHHLLLEEELLLLLLLLLLLEEEEELLHHH HHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |