NONHSAT078958
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078958 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
569 nt |
Genomic location |
chr20+:21876285..21899421 |
Exon number |
2 |
Exons |
21876285..21876340,21898909..21899421 |
Genome context |
|
Sequence |
000001 TGGAAGGTGA TGGGGAGCCA GCACATCACA TCGTGAGAGA GGGAGCAAGA GAGCAAACCA ACTCTTTCTC ATAATAAACA 000080
000081 CTGTGCTAAA TGGATGTATG GAGATGTTTC TCTCCAGCAA AGATAAGGAA ATGGCTGGAA GACTGCGAAA GAATAGATGT 000160 000161 GCCACTTTGG AAGTTGGCAT AAAAATGAAT GATATTTTTA CTTTTTGGAA AGCCAAGCAG GTCCCAGAGT CGTGGGGCAG 000240 000241 TACTTGGCCT CATCTCTGAG GCCACCCATT CTGCTGCTGG CAGCCACAGT GATGTACCCT TGGCACTATG TCGCTCCCCC 000320 000321 TACTTGGCAT CCTCAGTTTT TCTAAACTCA TGGGTGAGAG ACGAATGACG TCAGAGGCCC AAACCTTTGG ATGCTGATCT 000400 000401 AAAAGCATCA ACCAAAACCC AACACCCGAG CTTCGTAAGT TCCCATTTGA AGCAGGAGCA GTTTTTATAG CAACAGACAA 000480 000481 AGGATTGCTC TGTCCTTGTT GGAAGTGCTT GAGGACCAAG CACAGAGGTG GGCAAAGATC GTCATCAGGG CTTCTGCTAC 000560 000561 CTGTCTTAG |
Predicted Small Protein
Name | NONHSAT078958_smProtein_188:367 |
Length | 60 |
Molecular weight | 6334.1594 |
Aromaticity | 0.0847457627119 |
Instability index | 55.4372881356 |
Isoelectric point | 8.00018310547 |
Runs | 11 |
Runs residual | 0.0419841393251 |
Runs probability | 0.0427727192433 |
Amino acid sequence | MIFLLFGKPSRSQSRGAVLGLISEATHSAAGSHSDVPLALCRSPYLASSVFLNSWVRDE |
Secondary structure | LEEEEELLLLLLLLHHHHHHHHHHHHHHHLLLLLLLLHHHLLLLLLLEEEELLLEEELL |
PRMN | - |
PiMo | - |