NONHSAT079097
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT079097 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1099 nt |
Genomic location |
chr20+:24045119..24047430 |
Exon number |
2 |
Exons |
24045119..24045145,24046359..24047430 |
Genome context |
|
Sequence |
000001 tgggggctcc ccttgttcta cattatgGAT ATGATCCATG GATGCACAGA GGGCCTTTGT ACTTTGCTGG AGAAAAGCGT 000080
000081 GCACACTAGA CAGACTCATC TCCCATGGAA TCTGCTGACA GATCTCTCTG GGGACCCCTG GGCAGCTATG TGTCCAGCAC 000160 000161 CACCAGTGGC TCCCCATTTC TGTGTCTTCT TAGAAGATCT GACAACCCAG CATACCTCTT GCTGATGTTA TGGATCTGCT 000240 000241 GGCTCTGTAA ACTATAAATT GGCAAACTAG ATTAATCAAA GAGGAAGCTT TCTGCATGTG TGCTAACAGT CCCAACTCTC 000320 000321 TAATCTCACA AGGCACCAAT GTGACACTTC TTGCTAAAGA ATGTGGTTAT TAATATATCT GTCTTTGGTT TTCTTTTCTG 000400 000401 CTCTTGGAGT GGAAAGCCCC TAGAGAAATA GTTCCAAAAA GAATTTATAA TATACTTGCT GGAGAAATAA GATTTAAGAG 000480 000481 GGCAGGCTTT CACATCAAAG TTTCAGCATA TGGTAATGAA GGTTTCTGTT CAGACAGGTG GAGGAGGAGC TGCCTACATT 000560 000561 TCCTGCGGGG GGTGGAGGGG AAGTAGGCAT GGCGGTGAGT CCTGGGCTCT CAGACTTTGC TTATCATATT GTAACAGCTG 000640 000641 ACCTTGGTCC CCTTTTTGGC TCTGTCTCTA ACCCACAGGT CAGCCTAGGA TGTCACTGAT TCAATTTATT TCAATGTCAG 000720 000721 GTTGTCagat ataatttaca tacagtaaca ttccgttccc ccttttcagt atgcagctct atacgttgtg acaaatgtat 000800 000801 gccattctat aaccaccatg atgaagacac ggaacatttc catcacctca gaagttccct tgtgcccctt gtagtcagct 000880 000881 cctcttctca gacccacccc aagctggcaa ccacgggtct gctttctata cctatagttt tcctttttca aaatatcata 000960 000961 taaatagTCC ATAGGCATTT TAACAGCCAA GGTGCCTAAT AAATAGTGCA CTGTGACTAT CATTGTTTTT CTTGAATTAA 001040 001041 AAAGCCCACC GTGGAGGTGG GTACGTGGAG CCTCTCCTAA CTCCAGCTTC CATAAGCAG |
Predicted Small Protein
Name | NONHSAT079097_smProtein_104:256 |
Length | 51 |
Molecular weight | 5652.6104 |
Aromaticity | 0.12 |
Instability index | 79.854 |
Isoelectric point | 7.71356201172 |
Runs | 7 |
Runs residual | 0.0246783625731 |
Runs probability | 0.043795896737 |
Amino acid sequence | MESADRSLWGPLGSYVSSTTSGSPFLCLLRRSDNPAYLLLMLWICWLCKL |
Secondary structure | LLLLLLLLLLLLLLEEELLLLLLLEEEEEELLLLHHHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |