NONHSAT079374

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT079374

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3016 nt

Genomic location

chr20+:31442380..31446532

Exon number

3

Exons

31442380..31443387,31443441..31443682,31444767..31446532

Genome context

Sequence
000001 TGCCTGTAAT CCCAGCACTT TGGGAGGCCA GTGCAGAAGG ATTGCTTGAG CCCAGGAGTT TGAAACTAGC CTGGGCAACA 000080
000081 TAGCAAGAGA CCCTGTCTCT ATTTAAAAGA TTTTATATAT ATATATGATC ATATATAATA TATATAAGAT ATATATGATC 000160
000161 ATATATATAA TATATATATA TATGATCATA TATATCTTAT ATATATATAT GCAGTTTGGA ATTCTATTTG TCTTGCCTTA 000240
000241 TTTGCTTTTT AAAAATTTCT ACCTTAGTTT TTTCCTGGTT TACTTTGAGT GTTTTTTTGT AGTCGGAGGA GATTGTTGGT 000320
000321 GCGGCTGGGT GTAGGTATGA GGCAGAGGAG GAAGAGTAAT TTATTCCATC TACTGAGCCT TTCATTTACT TTCTGTTTTA 000400
000401 GCAGTAGAGT GGGATGTCGG AAGCTTTTGT TGGGTGAGAG TCAATCTGTC AGGGTAAATC TTAAAAAGCT GGATTTGTGG 000480
000481 TTTAGTTACT AGTTACTGTG TCTCCAGTGG AGACAAAGAT TAGTTTTTAA GATTTAGCCT TAATGGATGA TTCACAAATT 000560
000561 GCAATGCAGA GTATTGAAGT TAAGTCCAAG GTCAAGCACA CAAGTGGGTA AAACTGAACA TATGAAATGG GTGTGTGGCT 000640
000641 GGCACCCACC TCTGACCTTT ACTGAAATAA ATGAGGAAGA CGGTGCTGTA AGTGGAATGC CACGGACCAG GAGTTAAGAC 000720
000721 CAGAGTCCTC TGCTAGGCCC TGCATCTGAA GTCTGCAGAG CATGGCTTTT CATTGGCTCA GTGAGGAGTT GAGTCCTGGT 000800
000801 TCAGAAAAAG TTACCGAGGT CTGTAAAAGT CAGTAGGATA CCGGAACAAG AAAGAGTGGG AGAGTGTACA GTTCCCAGCG 000880
000881 AACATTGCCA GTGGAGGCTA ATTTTCACCA GTGAAGGGCG ATTTTGATAG AAAAGCACAG TGTCTCAACT ACTTGTGGTT 000960
000961 TTTGATTCTG AAAGAGGAGG CTTTGGCAGG AGCAATAATA CACGTGGCGC TAATTCTAGT ACCTCCATCC CCGAATCGTC 001040
001041 TAAATGTATT TTACCCAGGA CCTGTCATGG TTTATCTGAG TGACCAGTTT CCTTTCCTCT CTTGCTTATT TATCATGTTC 001120
001121 ATATTTATAT TTTTCATAAT GGGGCCTATT TATATATTTT GAAGTAGTTC TAGTGATTTT AAGATCCAGC AAAACTTCAA 001200
001201 GGTCATCTGG ATTTTGGTGT TCTATTTAAG TTTTCTAACT TGATACAGTC CGTGAACCAC TGCACCCGGC CTGAATCATG 001280
001281 GTTTTTTGAA ACCATTGGCA TCTGAACCTG TAGCTCTCTC TGGTAGTGTT GTGTGGTTTT AAATGTCATG TGAGCTGAGT 001360
001361 TACTGACCTC AACCTACTGC CAGATGAAGG TGTGATCCTG TGATACCAAT CTTGAGGGTC CCTTCTAGTT TTAGCAGTCA 001440
001441 GTGACTTCTC TTGTTTATTT TTGTTTGAAA AAGTAAAAGG CTCTCTTTTT GGCTATAGAG TTGCATCTTG AAATTTTTGA 001520
001521 CAAATTACAT AGAGCTGAAG AAGGATACAA GTTTTGATAT CTTAAAATCA CAGGGTTGAA GCTTGAAAGG ACAGTATTGG 001600
001601 CATTGCAGCT AAGTGGGAGT GTGAGGAAGC GCCTTCTCTA GGGCAGGTAA TTGCATCTGT TAATGTGGTC CTTGGGCCCC 001680
001681 TGAGTTGCTG CCTTCCAATC AGAATTCCCT TAGCATTAGC CAGTGACGCC TGAATTAATC TCAGGTAGGA CTTCTAACTT 001760
001761 TTTTCCAAAA TTATTTTTGT GCAGAGGTTT ATCTAGATTT TTCTTCTAAA TGTCCTCCTC CCCACTTGTT TTATTATTAC 001840
001841 TGTTTTTTTC TCTCTTTAAT TTTTTTTTTT TTTTAATAGA GACATGGTCT CACTATGTTG CCTGGGCTGA TCTCAGACTC 001920
001921 CTGGGCTCAA GTGATCCTCC TGCCTCAGCT TCCCAAAGTG CTGGGATTAT AGGCGTGAGC CATTGCGCCT GGCTCTGTTA 002000
002001 CTGTTTTTCT AACCTGAGTT ACTTAGGATC ATATTTTCAT TCTTTTTTAA AAAGATGGGA GTTTTCTGAA CTTTTCCTTA 002080
002081 ACTAAAAAGT GGAATGCATC TTAATATTTT CCTTTTTTTA CTTGTGTTTC TCCCCAGGGA GGGAAAAACA TATTTATTGT 002160
002161 GACAGAATTT AGCATATTTT AGGCCACATT AAAATACTGA TAAATGTATT AATCAGTGAA AATAGGTTAT AGTGAAAAAT 002240
002241 ATATACCATT TGATTAATAA AAATGTTATT GGAAAAATGC AAGAACTGCT GTAAGAATTG CTAACATTGT GTTGGAAAAT 002320
002321 AAATATACTA AGCTAAGAAA CAATGGGAAA CTGTCATATG TAGGGCCAAC AGCCTTTTTT TTTTTAAACC CTTCCAATTT 002400
002401 ATTAATATCT AGTCTAATAA ACCCTGATTT ATAGGACCTC TGCACCTTTT TTGACTTTTT ATTCATCCAT TCTTAATATT 002480
002481 CTACACTATG ACAAAATCCT TAAAACTCCA TTATTGATGA AATGGGAACA GACTTTTGTT TTTGTATGTT GGTGTTCTCT 002560
002561 GAGTGGTGAA GGCCCAGGGA GAATGTTTTG TTTGGTGGTC ACTTAGCATT TGAAAACATC CACTTCCTTG TGACTTAGCT 002640
002641 GGGTATCTTT TAACATCTGG AAGCCACGTC CCTGATTGAA ATCTCTGGAG ACAACTTACC TTTCACCAAC TTGTCTGCCA 002720
002721 AATTGCACCA TGGACCAAGA TTGCAGTGGC TGCATCAAGT CTAGGCCTGC CCTGAAGTCT GGATTTGTAA GTCCCCCATT 002800
002801 TCAAATGGGG CAGAAGGCAG AGGAGCAGAG GAGCCACTGT GCCTTTCGCT GTCCTGGAGC CAGTTGGCCT TCTGGTTTTG 002880
002881 GTGAACCCTG CTTTTATAAG AGGACTCCCT GGCATCTTCC AGTTTCCCGC TACTTGTTTT ATGTATTATT TTATGTCTGT 002960
002961 GTTTGTCCTG GAGTGCTGTA ACTCCTTTCA CTGTCTGCTG TAAGTTCAAC TTCTTC
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Predicted Small Protein

Name NONHSAT079374_smProtein_2729:2980
Length 84
Molecular weight 9384.8281
Aromaticity 0.156626506024
Instability index 68.396746988
Isoelectric point 8.76544189453
Runs 7
Runs residual 0.0556894243641
Runs probability 0.0538143185203
Amino acid sequence MDQDCSGCIKSRPALKSGFVSPPFQMGQKAEEQRSHCAFRCPGASWPSGFGEPCFYKRTP
WHLPVSRYLFYVLFYVCVCPGVL
Secondary structure LLLLLLLLLLLLHHHHLLLLLLLLLLLLHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLEEEEEEEEEEEEEELLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLHHHHHHHHHHHHHHHHHHLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiTTTTTTTTTTTTTTTTTTooo