NONHSAT079463
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT079463 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1069 nt |
Genomic location |
chr20-:33576717..33578944 |
Exon number |
2 |
Exons |
33576717..33577563,33578723..33578944 |
Genome context |
|
Sequence |
000001 AGGGGGAAGG GGTCACCCAC CGCTGCCGGA AGTCGGTGTA GAGCAACCTG TTGGGGAACC CTTGGCGGCA GATCCGGATC 000080
000081 CCCTCCAGGA CCCCATTGCA GCGCAGCTGG TGTAGCACCA AGAAGGCATC CATGACCCCT GGACGTGAGA GGGGAAAAGG 000160 000161 TCAGAGGTCA ACAGGCACAC CCGCAGGCCC CAGAGAAAAA GCAGCAGTGG AGACCCTGCG AGGATGGACA GGATGCCCAG 000240 000241 TGGCTGGGAA CAGAACGAGC TTGAAAAGCC ACCATCAAGC CAGTCCATCC TGGAAGGACT GAACCCCTGG TTCCCCAGGC 000320 000321 CACCTCCCTT CTGGGAGCCT TCCCAGATCC CCAGCTTCAG CCATCTCCCC GGATGGTCAG ACACCACACC CACTCCAAGA 000400 000401 ACCCATCTCC TAACAGAGAA AAGTTTGTGG CTTGGCTCCA GTCCCCTCCT GCAAAATCTG CAGCACTGAG GTGTCATCTT 000480 000481 CACTTCTAAC AATGGCAAAC CCAAGCTGGC ATCTCTGTAC CCACTCTCAC CCCCGCCACA GCCATGGCTG TCACAcacaa 000560 000561 acatggggta agtcaaaaaa agccatcaag ttcacatttt ggcttcctca ctcactagct gtggggccct ccgacatcac 000640 000641 taagcctcag tcttctaacc tgcagagtgg gaagatgaat gtcttcagtg ctgacataat aTTTAAAAAG CTGTCAATCA 000720 000721 CCTAAACGCC CAGCTGTAGG GGACTGCAGA AATGCATCGT ATGAAACTCA TCCACTGCAT GAACTACTCT TGCCATGAGC 000800 000801 AGCATTCAAA ATACATTTTC AGAGAAAAAG TAGGATATGA AATGAAATCT GTGTCTATAA AAGAAAATGG ATAggccagg 000880 000881 cgcagtggcc cacgcctgta atcccagcac tttaggaggc caaggtgggt agatcacttg aggtcaggag ttcgagacca 000960 000961 gcctggccaa aatggtgaag ccatgtctct attaaaaata caaaaattag ctaggtgtgg tggcgcatgc ctgtaatccc 001040 001041 agctacttgg gaggttgagg cataagaat |
Predicted Small Protein
Name | NONHSAT079463_smProtein_491:724 |
Length | 78 |
Molecular weight | 8624.8319 |
Aromaticity | 0.0909090909091 |
Instability index | 43.2311688312 |
Isoelectric point | 10.0347290039 |
Runs | 8 |
Runs residual | 0.0321852060982 |
Runs probability | 0.0462153329801 |
Amino acid sequence | MANPSWHLCTHSHPRHSHGCHTQTWGKSKKAIKFTFWLPHSLAVGPSDITKPQSSNLQSG KMNVFSADIIFKKLSIT |
Secondary structure | LLLLLEEEELLLLLLLLLLLLLLLLLLLLLLEEEEEELLLLLLLLLLLLLLLLLLLLLLL LEEEEEHHHHHHHHLLL |
PRMN | - |
PiMo | - |