NONHSAT079595

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT079595

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

5393 nt

Genomic location

chr20+:35405846..35415173

Exon number

2

Exons

35405846..35408377,35412313..35415173

Genome context

Sequence
000001 GCTGTTCATA TGACATACTT TATTTCCAAT CTACAACCAT TAAAAACGCT TTATAAGTTT ACACTGTACA GTTATTCTCA 000080
000081 TGTCTGAAAT AAGACACAGG GGCAGGGAGA GCTGGTGGAT TGGACTGCAG TTGTCCTAGC ACCCGATCCA TCCTAGGAAG 000160
000161 GAGCCTTTTG AAGACAGAAG TGGAAAGGAG AGAATAGTGG ACAAGAGAGG TGGACAGTTG GCCCAAGGAT GCCCTTGGTC 000240
000241 CCTTCCCTCC CATGGGCCTT GCCCTGGGGG TCCCCCAGGG CCCATGACTG CAGGACCCTC ACCAGGAAAC CAGGCTGAGT 000320
000321 GGGAAGGGGG TTCACAGTAT TGGCGGGGGC TGGGGAGGGG CCAGGATGAG GAGGAAGGGC AGCTTCTGGC TCTCTTCCCA 000400
000401 GCTGCTGGGG GTTGGAGCTG TTTTTTGGCA CTGTCTACAA GGTATCCCTG GGGTTGGGAG GAGGAGGAAC TGGGGATTTA 000480
000481 GGATGCTTTC TTTGTGGAGT TAAGATTTCT TTCAGTTTGA AGAGGCGCTA TCTGGCCTAT GGTGAGGTTC CCAAGGGAGA 000560
000561 AACAGTCAGG GTCTTCTGCC TCCTGCCTCC CCAGGACTCC CACCCCCTCC CTGGCTGGCA CCATCCACAC AGCCTTTTGT 000640
000641 AAAACCAAGA CAAGTGAGAG AGGTGAGCAG GAGCAGGGAA ACAAACAATG TGTGCTTTCT CCAGGCCCTT CAACTTCTCT 000720
000721 TCCTCTTCCA AGAGGAGCGA CTATAGGGTT GGTTTTTGTT GGTGGTGGTT CCCAATCTCA GGAGTCCAGA TAAGGCTGGT 000800
000801 GTTTTCCACC TGTTCTTGGC CTAGCCAGTC CCAGTCCCTC CCCAGGCTCT ACTAATGGCT AGCCCAGATC AGCAGTTGGC 000880
000881 ATATTCTTAt gcgtcagaat catttggagg gctccttaaa accccagctt gtagggcccc actccacaag ctctaattca 000960
000961 gtgggtcttg ggtggggctg ctaatctgca cttctatcaa gttcccaggt gatattcctg ctgctggaat gcaatacaag 001040
001041 aaccactgGC TGAGAATGGT GCCCGCAGTC ACCTCATTCT GAGCAGCCTG GTGTCTCCTG GGCAGCACTA AGGAGCTGGG 001120
001121 CCACAGCTGG CAAAGCCCAG CCTTGGGGCA CCACATCACC TGGGAAGCTG CTGGAAATGG TCTTGGGGTG AGTCCCCCGT 001200
001201 GCAGAGAAGT AAACTAAGGC ACAGAGATCA GTGGCAGAGC TGAGAGAGGA GCCAGGATAC CAGGGCCCAG TAGAGAAAGG 001280
001281 ATGGGGCTGC AGGACCCTAC AGCATGAGGG GTGCTCTAGG GACCACAGGG CCATCCTGGT GCTCATCACA GGATCACAAG 001360
001361 ACTGGGAAGG TAGGAGAAGT GAAGACATCT GCCCAGACCT GGGCCAGGTT TCCAGATTGC CAGCTGAGGT CCCTCTTCTT 001440
001441 GGGAATGGTT TGAGTGGCTT CCAAATAAAG AGTGACAAGG CAGCCAGCCC TGACTGCCTC AGCCCTTCAA AGATGTTTAG 001520
001521 AGAAAACCAA AGGTCCCTTC CTCAGGGCAT GGTGTCCAGA AAGCTGGTGA AGGGCAGGAA GGGAGGGGAG CAGGGCCGTT 001600
001601 GGGATAGACA AGCAGCAGAG GAGGCTCCAA GGAGGGTGAG GAAGGAGTGG CAGGGCTGGC ATTGGAGAGA AGCCCTGAGC 001680
001681 AGGAGACTTG GGCCCAGCAT CATGTCCTCA GTCCCCTCAG GACTTGGGTC TGTATATTTT GCAAACTGCA AATGCTGTTG 001760
001761 GGTTGGGAGG GGTAAGGCAT AGAGTTGGGG TGAACTGTAG ATTCTGCCAG GACAAGCAGC TCTGAGAGTG GTGAGGTCCA 001840
001841 GAGGAGAATG GAGAGGATGG TTGGATACTG AATGGACAAA GAGATGGATC AATGACCAGA GACAGGGAGA GAAGAACCTG 001920
001921 TCAGGCAGCA CCTGCTTTAC AGTCAAGGCC ATCTGGGCCT GGGCAGGGCA GGGGAGGAAA AAGGAGGGAT CCAAGCCCCC 002000
002001 CCCACCCACC ACCACACACA CGCCCATTGC AAAGTGCTGG GGCTGCTGCT GGCAGGCTGC TTACAGAGAA GACAGTGTGG 002080
002081 CTTAAGGGTG GCACCGGGGG GTTGCTGGGG CAGGGTGAGC CCAGTGAGAA GGGCTGGCAG GGCTGGTGCC TCCTGATGCA 002160
002161 TTGGAGGAAG AGGCTTTTTT TTGTGTGTGT GAGAAAACAC AAAATAAATA AACACAGAAC CAGGACACCA CCACATTTGA 002240
002241 GAGCAAATAT CAGAGTTGGG AAACCACAGA CGCGGACAGG AAGGCTTCCC TGGTAGGAAG CAGGGGGACA AGAAGCCAGT 002320
002321 TACTGAGGTT ACGGGAAAAT CCGCACGAGG CAGCAGTGCT GGGAAGAACA TCCTGGGAGG ACTGAGGGCT GAATACTATA 002400
002401 GTGAGCTCCG GACCCAGAAG AGGAAAACCT GGCATGGACC AGGGCCACTC CATTTGCTGG CAGGAACCAG CCAAGGAGAA 002480
002481 GAGGAGGCAG GAGGACAAGA GGCTTTGGAG GGAGATGATA AAGAAAGAAT GGCCCCACGT CCAGAGGCTT CTGCAGGAAC 002560
002561 AGTGATGAGT GGCCTTGCAC AGTGGCATGC AGGAAGTAGA AACTGGGGCT TTACTGAAAA CCAAGGTCTG GCTGAGACAA 002640
002641 CAAAGATGGC AAGGACAATC CTGGACGGTA CGATGGTAAG GCTGAGTGGT CCGTAGGTCT TGGGGCTCAG GTCCCACGGG 002720
002721 GATTTCTCCC CGAGGCTGAG TACGCAGCCT CCCTGGCTGT CGCTCTGGGA GGTGGCAGAA GGCCTCTGGT GGCTTGTGGC 002800
002801 CTGATGTGAA TCCCCTCACC TGGAGATAAC CTTGGAGGGC CCCCCTGACC TCATGGGTGA GAGCAGCAGC ATCCAAGAGC 002880
002881 GGAACTGGCC CACAGCTCCA CTGGCTGCCT GCTCTGCCCA CACCAGTCAC TGGGGCATGG AGGAGGCGGC TGGCGGGACT 002960
002961 GGCATGACCC TGGTGTTCAG CCTGCAGGGA AGGGAGATGC AGGACTTGGG GTAACTGGTC CAGGTGATCC CGAATGGGTG 003040
003041 GGTCTGGGAA CTGGCAGGTG GGAGGTGGGA GTGCAGGGGC GCCTCCAGAG TCCTGGGGGC AGATCAGCAA AGCTACTGGC 003120
003121 TTTTGGTCTT CCTGATGGGC AATTCTGCAG ACAAGCTGAT CCATCCTGGT GTTTCCACTC TGGGTCCCCA GTCAGTTACA 003200
003201 GGAAGGCTGA TGTCTATGTG TGTGTGGGGA GCATGTGTGC AACCAAAAGG GGTTCACCGG CACCAAGGCG AGGCCATGGG 003280
003281 AGGCGCTGCC CCACATGCTG CAATGAGCCA CATCGAAATC CAACCAATGG CTCAGGCAGC TCACAGGGGA CGTGAGGAAG 003360
003361 GGCGGGCAGC AGAGCTGGGG CAGGGAGAAG AGCCGTGAAA GGCCATAAGG CTAAGGAGAG AGGCTGGTGA AAAGGCTGGC 003440
003441 AGGCTGGTGA GAACCGAGGC AGGCTGGGAG ACACTCAGGT TTATGTGCAA AGCTGCGATA AACAACATTC TCAAAGTTCA 003520
003521 GTCCTGTTTT CCTGTGAGTT CTCATTTGGG AAACTTGGAG GGATCTCCAC ACTCTTAATA GAGCTTTAGT AATCCACGTT 003600
003601 CGACTCATGA AGAAAGGTGT CAGAGGGAGG GAGGGAAATG AGACAGGCAA TGGAGAACGT CTGGGGAGTG GTGATGGCCG 003680
003681 TCCAGCCCTC CACCTTGTCA GTGAGTATTT ATAGACTGAC CGCTGGGGCT GGCCAAGTAC CAGGCATTGA GTAATAAGTA 003760
003761 GTGTTCTGAG GCCACATGGC CAGCCGTGTT GGGGTGCAGG GCTCCAGCTC TGTTGAGGGG CCCTCCAAAG CTGACCAGGA 003840
003841 GGCCAGGTCT CCAAACCTGG CTGCCAAGCG GCCTCGTCCA CCCAGGGGAC CCCATGCCTG CCCGTGCTGT TAGAGGCCTC 003920
003921 ATGTTGTCCC AGTGGCAAGA ATGCATGTTT CAACCTCCAA TAAATTACCT TAGGGACTTT GGGGtaaatt aaattattaa 004000
004001 aataaaGTAA ACCACCTTAA ATATTTATAG TAGGAAAAAT TCAAATAAAC AATCTAGGCA AGATACGTGT TTCCAGGCCC 004080
004081 CAGTCTACTG CTGTGTCCTG GGCTCTGGCC TCTTGGTGTT CTCCTGGGCC TGACCTGGCC AACCAAGAAT CTCTTACTGG 004160
004161 GAATATCTTT GCCCCCCGAC CAGCTGCAGG ATGTAAACAC AGTGGAGATG TAGTGCCTGC TGCCTCTCAG GGTGCCAGGG 004240
004241 AAAGAGGCCT CTGAGATCAC TTGAGATCAA GGCAGTGTAT TTAGGCATTT ATCTATGCAC CAGGTCTTGA GACTGACTCT 004320
004321 ACCTATTTCT GTCCTCAAGG GGTCTGCTGG GAACGTTGGG GCCCCAAGTC ACTTTGGCAA GGAAGGCAAT TGCAATCACT 004400
004401 CCCCAACCCT GAGCCCTGCA TGTTTCCACT TCGCCTCCCA GCTCTTGCTG CATCCAGGCT ATGGGCAGGG AGATCCAGGG 004480
004481 CTCCAGGACA CTAAGCAATG GCCCTGGCTA CTGCCCTATC ATACTCCCTA GTGTCCCAGC AATCTAGAGC AGTGGGGCTG 004560
004561 GGAGGAGGAG GTGGTGGAGA GAAGGAGGTG ATGGTGATGA TGCCCAACAG GGCTCCACCA GGAACCAAAC ATGGAGCCCT 004640
004641 AGAGCAAAGC CTGTTCTTCT CAGCAGTGTC TCCTCCCAAA TGAAGGGGTG GATGGTCAGC AGGAAACATC TCTCCGACTC 004720
004721 CTTTTCCCCA AAGGCATGGC CAGACATGTA TCCTTCTTGG GCTCTTCCAA GAGGGTGGCA TGGGCAGAAC CAGGCAAGGC 004800
004801 TCTCTCTTAG GACCCAGGGA TCGGCTCTTG ACAGATCTCT CAGTGGATGC TTGGGAAGCC CAGGTTTGGT CTCTCTCCCA 004880
004881 CTCACTGCCT TCCCCTGGGA AGTCGAAGCT CACCACCCAG GGGCCAGCAG GAGACCCGGC TTTACCTTGA TGTGAAAGCT 004960
004961 GCATTCTGGC AGTGGCATCA CTGCTGTCCC TCCAGGGCCA GGCAATGCTG AGGACACAGC CCCTCGCCTC ACCTCGTCTC 005040
005041 GTCTCTGCTG GTTCCCTTCT GCTATCCAGG GGCTGGGCTG GTTGAGGCGG GGAGCTTGGC TGCTCTGTCA CTCGCTGGGG 005120
005121 GGGAGTGCCC TCTCCTCCCC ACCCCAGCTG GACTCTGAAG GGTGCAGCCT GCACTTGGAA GGAGAGTGGC GGATGGCAGA 005200
005201 GCGGGACGAT CGGGCGAAGC AGGAGGTGAG AGACTGGGTA CTACAGTCAC AAACAGCGTC CTAGGAAGAG GGAGGCAGGG 005280
005281 AGGCAGGAAG TCAAGAGGAG CCAGGAGACA TGGACCACCA TGAGCTGTGT GGTATGCCAG GCAAGGAACT GAGACTCGGC 005360
005361 CATAAACCAG TTCCCAGGGG CTGAAGCTCC TCA
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Predicted Small Protein

Name NONHSAT079595_smProtein_4679:4954
Length 92
Molecular weight 10085.4504
Aromaticity 0.0989010989011
Instability index 52.410989011
Isoelectric point 10.4026489258
Runs 12
Runs residual 0.00160256410256
Runs probability 0.0372578460814
Amino acid sequence MKGWMVSRKHLSDSFSPKAWPDMYPSWALPRGWHGQNQARLSLRTQGSALDRSLSGCLGS
PGLVSLPLTAFPWEVEAHHPGASRRPGFTLM
Secondary structure LLEEEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHEELLLLLHHHLLLLLLLLL
LLEEELLLLLLLLEEELLLLLLLLLLLLLLL
PRMN -
PiMo -