NONHSAT079643

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT079643

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2349 nt

Genomic location

chr20-:36840874..36846585

Exon number

3

Exons

36840874..36842145,36845262..36845407,36845655..36846585

Genome context

Sequence
000001 GGCACTGCCA GGGCAAAGCT GTGGAGGTGG GAAAGAGCAA GAAAAGTTCC AGAGACAGTG AGGGAACCAG CTTGGATTGc 000080
000081 agagttcagc tgagatgtta tctcccccag agattcttac cagaTGGCCA AGCCCAAAGA ATATtctgaa tcccccagag 000160
000161 ggtttcttaa aatgcagttt ccagggcccc atccTAGACC TAATAACTCA GCCTCACAGA GCCGGGGGTT GGAGGGCAGG 000240
000241 GAAGCTGCAT CAACGTGATG CGAtgtgaca aggctctgga ccacagggtg attcagcccc gtatcagcgc tcaggaattc 000320
000321 tcaggccagt ggggagcggg ggcgggggcg gggacaaaca gggaagcgca cagtaaggga gaatgtgggg actcagagca 000400
000401 ggagcctttg gagtcagaga agttttccag aaggaacatc taagcagagc ccggctaggc aaagtgaact gccatggcga 000480
000481 gggcctggag aCTTCCAGAA GCGTGATAAC TGCTCTTAAt tgttcaaccc tcaccaggag ctaagccctg tgaggtgggt 000560
000561 gctattaggg tccccattct acagatgagg aaactgaagc tcaggaagtc tcctggctcg ccagcaaggc agctggaggt 000640
000641 tgctgaCCTC CGAGGGAGGC CCCAGCCAAG GTGGGTGCTG AGTGGGCGCC CCCTCCTCTC CCCTCTCAGG CCCAGTACCG 000720
000721 CCGAGGCCTG GAGCTGTCCA AGCAGGCCGC TCAGCTGGGA GCTACAGCCA GAGGGGCTGG GGAGGCAGAA CGTGCAGAGT 000800
000801 TCCCAGAGCT GGCAGCCTTT GCCTCTACCC AGCGGGCCTT CCAGGCTGAG CTGACCCACT TTTACATGGC GGCCGAGCGG 000880
000881 CAACGCACGG ACCTCGAGAC GCTGCTCCAC CTGCACCGCT TCTGCAAGAG GTCTTGTAAC AGGAAAAAAA CAGAGGAAGG 000960
000961 GGAAGAGCTG AGATTTGAAC ATAGATGTGT CTGTGGTACC CCGTGACATG CCTTATATGC TTCCCCAAAG AGAAGAGAAA 001040
001041 TGACGACAGA TCCCTTCACC AAGCAGGCTT GACCATGATG ACCTGGTTCC ACATGGACTG TCAGGACCTG ATGGCCCAGC 001120
001121 TCAGGCTGGA CAAGACCTCA AGGGTCAGTC CTGGGGACCA GCGCCGCCTC CACCGCTACC TGCAGCGACT GGCATCTGAG 001200
001201 TTCCCTGCTG AGAAGCTCGC AGCCGTGGGG CTGCAGGTGG CCTCCCTGAG CCGGGCAGGC CTGGGCCAGG AGCTATGGGA 001280
001281 GGAGGCCCGG ATCAGGCATG AGGAGATCCG GATGCTCCTG GAGAAGGCAC TGACCCACAG CTCTTGCCCA GAGGCTCCAG 001360
001361 CTGCTCACTC AGCGCGCCCA GAACGAAGAG GGGTGGCAGC CAAGGGCCAG GGTGTGAGTG TAGAGGTCAC TTCCAAGGGG 001440
001441 AGGTGGGATC AGCCTCCACT AGACTCACTG GGCATGGACC ATTTGCCAAA GTCCTATTGG CCTCCTGGGC CCCCCAGAGG 001520
001521 GGAACAGAAC AGAACTTTCC AGGCAGGCTC TCCACCCCAG GAAGCTGGCC AGGCTGCAGA GGCTGAAGAC GGCAAAGGCT 001600
001601 CCCACAAGCT GCCTGACCCT GCCCGCGAGC ATTTGCTTGC CACCACCTTC TTCCGGCAGC AGCCCCCCAG GCAGAGCCAG 001680
001681 GTCCCTCGCC TCACTGGGGG CAGCTTCTCC TCAGAGGGGA CAGACTCACA GACATCCCTT GAGGACTCAC CCCAGACAAG 001760
001761 TCCCCTTGCC TCCCTCTAGC TGAGAGGCCC CTTCAGTCGC ACCAGCCTCC AGGAGCACTG GGCCAGGGCC CAGCTGGAGG 001840
001841 GGTAGCTGGG AGCTCTGGTC AGTCCCAGTG AGACGTCACC ATGGAGCACT GGTTTTACAT TCTGCCTCTG CTGGGAGGAT 001920
001921 GAGAACTGTC GACCTGCCCC TGGCTCCAGA AAACTCCTGG AAGACCCGAT CTTCACCCAT GCAGAATAGC AAGAGTGGGC 002000
002001 GTCAGAACCA GGGCACAATA AATGGTGTGA TTGGCTCCAT CCCTCCAGGC TCTCATTGTG GAAAGACCTG TCGGCACAGA 002080
002081 CCCCTCCAGA GGTCTCGCTC GCAGGCAGGC AGACACCCAC CTGCAGCTCA GGAACATACA CAGCTCTCCC CTCGGGTACG 002160
002161 AGGGCCAGTG TTGCCCTTAG GCAGAATCCT CGGGGAGATT CGGGAGTGCT TCcttgtctt ggattccagg aaaatggacc 002240
002241 ctgagatgag gatttaagga tcagtgtgtt tggtgctgat ccaggaacct ctgctggggg agtaggaggc gaatctgcaa 002320
002321 agggaataaa gagtatgttg tcaagcaaa
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Predicted Small Protein

Name NONHSAT079643_smProtein_584:853
Length 90
Molecular weight 9930.3215
Aromaticity 0.0449438202247
Instability index 96.9707865169
Isoelectric point 11.7658081055
Runs 11
Runs residual 0.0196078431373
Runs probability 0.0400828636123
Amino acid sequence MRKLKLRKSPGSPARQLEVADLRGRPQPRWVLSGRPLLSPLRPSTAEAWSCPSRPLSWEL
QPEGLGRQNVQSSQSWQPLPLPSGPSRLS
Secondary structure LLEEEELLLLLLHHHHHHHHHHLLLLLLLEEELLLLLLLLLLLLLHHHLLLLLLLLLLEE
LLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -