NONHSAT079881

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT079881

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2729 nt

Genomic location

chr20+:43120516..43123244

Exon number

1

Exons

43120516..43123244

Genome context

Sequence
000001 TACACTGCAT TCCTGGCCAG TCGCATTTGT TTTAATGCAG GCATGGCCAC AGCTCTCCTA GAGAATTATC TCAAAGACCA 000080
000081 GAAGGGACCT GGAGAGGCCT ATTTCTTAGG TTTTTCCAGT TGGACAAGGA AGGAGTGGTT TCACTCAGCT TCTAGAAGGA 000160
000161 GTTGGAGCCT AAGTTTATCT GCCTCCGGGA GCTGCTTGCT TTGTTTTGGC TCCGAAGAGG TATCAGATAG TTTTGACACC 000240
000241 TCAGGAAACT TGAACCAAGC TGTGAAACCA AGACCTCCCT ACGTGAAAAT CAAGGTGGTC TCCTTGTGGC TTCACCAGGA 000320
000321 TGTTTGTGTC AGGCTGTCTC AGCAGGGTGG GGAATGACCA GCCAGGGAGC ACAGTGAGCC TTACTCAGCA CTGGGGAGCG 000400
000401 CACTGGTGAG GCAAACCCAT GAACCTCAAG AACTGGGAGT ATGTTCCTTC AGGGAGAAGT TCTGGCCCAT TGCACAAACA 000480
000481 CTTGGAAATT AACTTTTCCC TAAATTCAAG ATAGTGTGGT GTCGGAAGGA AATGGGACAG TAAATTAGGA GACGCGGGCT 000560
000561 CCACCTTTAC CTTACTACGT GGCCTTTGAT GAGCTGGCTT AACATCCCTG AGTGATTCCA TGATAGAGAT CTATACTCCA 000640
000641 AACTTTATTC CTGGTATCTA GTTGGCTTCA CTGCCACAGA CACTGTACTC TCTCTTTTTA GAAGTTTTTT TCCTTTTTTT 000720
000721 TCCCCCTCAA TTGGCTTATT TAGTAAATTT AGGTCTGAAT GAATTGGTAC CTAAAAGCTT CCAAATCTAT ACATTTCAGA 000800
000801 ATATGGGAAT TTTCTTCCTC TTCTTCCCCC ATATCCCAAC ATGGAGTTCT GGAAAACTGT GCCTCTTCCC CTGTTCTGCC 000880
000881 TTCATGGGGG AGAGACTGGA TGAAATCTAC AAAAACAGCC AAAAGTGCCA CCCTGGCTTC ATGTCTTGAA TTTCTAACTT 000960
000961 GCTCTTGGCA AAGGTCGCTT TATTTTTTAA TTTTTTTCCT TGCATTTTCT TTTTTATTCT ATTGCTGCTG CAAAAATTAA 001040
001041 GGCAAAAGTA GCTTTCGATC TTTCATATTT CATCCTGGTT TCACAAGGAG TCACTTATCT TAGGAGGTCT GTAAGTCAGG 001120
001121 TTACAAGGCC GGGAGCGGTG GCTCACACCT GTAATCCCAA CACTTTGAGC GGCTGAGGTG GGTGTATCAC CTGAAGTCCG 001200
001201 GAGTTTGAGA CCAGCCTGGC CAACATGGTG AAACCCCGTC TCTACTAAAA ATACAAAAAA TTGGCTGGGC ATGGTGGTGG 001280
001281 GTGCCTGTAA TCCCAGCTAC TTGGGAAGCT GAAGCAGGAG AATCACTTAA ACCCAGGTGG CGGAGGTTGC AGTGAGCCGA 001360
001361 CATCGCGCCA TTGCACTCCA GCCTGGGTGA CGAGTGAAAC TCCATCTCAA AAATAAAAAT TGAAAAATCA GGTTACAAAA 001440
001441 CACCATTTTT CCCGAAATAA GACAATAAGA GGCTTTTCTG TGAATTCCTT TATATTGAGC CTTTCAGAAT TCTCCCTGGG 001520
001521 TGGGCAATTT CTTTAAATAG TATTTGACCC TCAGATCAAT CCTGGGAATT TTTTCCATTT GGGTAGCAAA AGCTAGAGTA 001600
001601 TTGCTGTGGC GATTATAATA CTTTTAAAAA GTTTTACCAT TTTAAAGTTG CCAACATTTA ATTAAGGTTT TCCTTTGAAG 001680
001681 CCTCCTTTAA TTTAGGGAGT AAAATGTTAG CTAAACCAAT TATATACTAT ATACTATACA CTGTATCTCC TGTGGCCATG 001760
001761 AGAGGTGTGG CTATACCGAA CAGAAACATG CCTACTGTTC AGGAAAGATG TCAGTTCTGG TAACACCTCT CTGTATTGGG 001840
001841 ATCTGTTAAT TTTGTAAATC TAAATTCTTC TGCTCTTGGC CAGGTGCAGT AGTTCATGCC CTGTAATCCT AGAACTTTGG 001920
001921 GAGGCTGAAG GGGGGGCGGA TCATTTGAGG TCAGGAGTTT GAGACCAGCC TGGCCAACAT GGTGAAACCC CATCTCTACT 002000
002001 AAAAAGTACA AAAATTAGCT GGGTGTGGTG GTGCGTGCCT GTAATCCCAA CTACTTGGGA GGCTGAGGCA GGAGAATCGC 002080
002081 TTGAACCTGG GAGGCAGCGG TTGCAGTAAG CCAAGACTAT GCCACTGCAC TCCCGCCTGG GTGACAAAGC AATATTCTGT 002160
002161 GTCAAATAAA TAAATTCATT CTTCTGCTCT CCTGACTTAG AGAAATGGTT TGCTTAAAAT GCTAGTAACA AACATCACAG 002240
002241 TCAACAGGAG CTTGCTTCAT GCGAAGGATC AATGTGATTT GTGGATGGAG ATGATGGTGA TGAAATTCCT GTTTCATGGG 002320
002321 GCTGTTTTTC TTTTCATCTC ACTGGGCAGC AGGTTTAGTG AGGCAGTGAG ATGCTGCTGC TGTGGATTCT TGTAGCTATG 002400
002401 CCTCGGCTTC TTGGCATATC AGGTAGGAAC CTGTTACAAG TGAAATACTT GAAACCTCTC TGACCAAGAG CCTCTGATGG 002480
002481 AGTGGGAGGT GAGCTAATTC TCTGACCAGC TTGGGGCACT GTTTCAGCCA CTGGTCACAT TCCTTGCTTC AAACTGAAAT 002560
002561 TCAGTTTGGC TTTGAGTATA GGGATACATG GTGGATTCAT GTACTTCAGT GTTTGTTTTG ACCAAAGTTT ATTTTTCTAG 002640
002641 TGCATTTTCT AAGTCAAAGT GGTGAAAATA TGTAATAATT TTAGTATGCA TGACTCAGTC TGAAACAATA AAAATCTCTG 002720
002721 AAAAATGTG
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Predicted Small Protein

Name NONHSAT079881_smProtein_758:1039
Length 94
Molecular weight 10756.3768
Aromaticity 0.182795698925
Instability index 49.9775268817
Isoelectric point 9.03631591797
Runs 12
Runs residual 0.00189167662286
Runs probability 0.0278366601896
Amino acid sequence MNWYLKASKSIHFRIWEFSSSSSPISQHGVLENCASSPVLPSWGRDWMKSTKTAKSATLA
SCLEFLTCSWQRSLYFLIFFLAFSFLFYCCCKN
Secondary structure LLEEELLLLEEEEEEEEEELLLLLLLLLLEELLLLLLLLLLLLLHHHHHHHHHHHHHHHH
HHHHHHLLHHHHHHHHHHHHHHHHHHEEEEELL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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