NONHSAT079906
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT079906 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
885 nt |
Genomic location |
chr20-:43289248..43367608 |
Exon number |
2 |
Exons |
43289248..43289984,43367461..43367608 |
Genome context |
|
Sequence |
000001 agtaggtgag cttctccatc cctgtctgtc tagatgcaga gaacccaaag ccctgcagga tggcaaagct gcaacatgga 000080
000081 agtcacccgg atcaccacgt aaaggaaatc tctccaacca ggaacaaaca cctgccttgc aatattagga gaactgctgg 000160 000161 aacccaggag gcagaggttg cagtgagccg aatccgtgtc attgcactcc agcccaggcc aacaacagca agaattcgta 000240 000241 ttaaaaaaaa GGCTGGTGAG AGGGGCGTGG AGGTTGAGGG GTGTGGTAAA CTGTAGGAGA TAACGATTTT ATGTTGTGTG 000320 000321 TGtgctatgg tttggatgtg gtttgtctcc tccaaaatgc atgtagaaac ttggtcccca atgtaatggt attgggaggt 000400 000401 ggggccttta agaggggatt aggtcattag gagggattaa tgcctttctc acaggagtgg gttaattctc acagaagtgg 000480 000481 gtgagttatt gagagcagtt cattacaaaa gtgagtttgg cttcctcggc tttctcttgc ttcctcggct ttctcttgct 000560 000561 tcctctcacc ctacgatgca ttctgctgtg ttacaacaca gcacgaggcc ctcaccagaa gctgaccaga tccagccacc 000640 000641 ctgtcttgga cttcccagcc tccagaactg taaaaaacaa accccttttc tttgtcaatt acccagtccc atgggttcta 000720 000721 tgacagcaac agaaagtgga caaaTTGTGT AACATgcaca tgtccaggag ggtgtgtgag aggtaatcct gttgttacgg 000800 000801 ttgttctgta gggtgaccac aattgggaat ttccctggga ctgttttggt tttagcactg aaaactctgt atttcaataa 000880 000881 actac |
Predicted Small Protein
Name | NONHSAT079906_smProtein_59:295 |
Length | 79 |
Molecular weight | 8664.9777 |
Aromaticity | 0.0 |
Instability index | 44.4243589744 |
Isoelectric point | 10.6321411133 |
Runs | 12 |
Runs residual | 0.0201688555347 |
Runs probability | 0.0454498616265 |
Amino acid sequence | MAKLQHGSHPDHHVKEISPTRNKHLPCNIRRTAGTQEAEVAVSRIRVIALQPRPTTARIR IKKKAGERGVEVEGCGKL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLEEEEEEEEEEEEEELLLLLEEEEE EHHHLLLLLEEEEELEEL |
PRMN | - |
PiMo | - |