NONHSAT079906

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT079906

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

885 nt

Genomic location

chr20-:43289248..43367608

Exon number

2

Exons

43289248..43289984,43367461..43367608

Genome context

Sequence
000001 agtaggtgag cttctccatc cctgtctgtc tagatgcaga gaacccaaag ccctgcagga tggcaaagct gcaacatgga 000080
000081 agtcacccgg atcaccacgt aaaggaaatc tctccaacca ggaacaaaca cctgccttgc aatattagga gaactgctgg 000160
000161 aacccaggag gcagaggttg cagtgagccg aatccgtgtc attgcactcc agcccaggcc aacaacagca agaattcgta 000240
000241 ttaaaaaaaa GGCTGGTGAG AGGGGCGTGG AGGTTGAGGG GTGTGGTAAA CTGTAGGAGA TAACGATTTT ATGTTGTGTG 000320
000321 TGtgctatgg tttggatgtg gtttgtctcc tccaaaatgc atgtagaaac ttggtcccca atgtaatggt attgggaggt 000400
000401 ggggccttta agaggggatt aggtcattag gagggattaa tgcctttctc acaggagtgg gttaattctc acagaagtgg 000480
000481 gtgagttatt gagagcagtt cattacaaaa gtgagtttgg cttcctcggc tttctcttgc ttcctcggct ttctcttgct 000560
000561 tcctctcacc ctacgatgca ttctgctgtg ttacaacaca gcacgaggcc ctcaccagaa gctgaccaga tccagccacc 000640
000641 ctgtcttgga cttcccagcc tccagaactg taaaaaacaa accccttttc tttgtcaatt acccagtccc atgggttcta 000720
000721 tgacagcaac agaaagtgga caaaTTGTGT AACATgcaca tgtccaggag ggtgtgtgag aggtaatcct gttgttacgg 000800
000801 ttgttctgta gggtgaccac aattgggaat ttccctggga ctgttttggt tttagcactg aaaactctgt atttcaataa 000880
000881 actac
[back to top]

Predicted Small Protein

Name NONHSAT079906_smProtein_59:295
Length 79
Molecular weight 8664.9777
Aromaticity 0.0
Instability index 44.4243589744
Isoelectric point 10.6321411133
Runs 12
Runs residual 0.0201688555347
Runs probability 0.0454498616265
Amino acid sequence MAKLQHGSHPDHHVKEISPTRNKHLPCNIRRTAGTQEAEVAVSRIRVIALQPRPTTARIR
IKKKAGERGVEVEGCGKL
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLEEEEEEEEEEEEEELLLLLEEEEE
EHHHLLLLLEEEEELEEL
PRMN -
PiMo -