NONHSAT079975
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT079975 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
990 nt |
Genomic location |
chr20-:44376583..44420571 |
Exon number |
6 |
Exons |
44376583..44377053,44387031..44387070,44403039..44403083,44404056..44404241,44416475..44416621,44420471..44420571 |
Genome context |
|
Sequence |
000001 CGCGCTGCTC GTCCGCCCGG AAGCGCGACG CTGGAGCTGC GGGGTTACCA TGGGAACCGA ACCGCCGCGC CTCGCCCAGG 000080
000081 ACAGTTACAC TTAGAGGCCT TGGAGGAAAA GAGATTGCCC TAGGGTTATT CGGAAACAAT CCTGTTTGAA AAGGTGCATC 000160 000161 ACTGATGAGA CATGTCCAGG TGTAAAGAAA TGCTGCACGC TTGGCTGCAA CAAGAGCTGT GTAGTCCCAA TCTCTAAACA 000240 000241 GAAGCTGGGG CGGGGCGGTG ATTGTCCAAA AGTTCTGGTG GGCCTGTGCA TTGTTGGCTG TGTGATGGAT GAGAATTGTC 000320 000321 AAGCTGGAGA AAAATGTTGC AAGTCAGGCT GTGGCCGCTT CTGTGTCCCA CCAGTCCTGC CCCCAAAACT GACCATGAAC 000400 000401 CCCAACTGGA CTGTGAGGTC TGATTCCGAA TTAGAGATCC CGGTGCCCTA GCTGTGCTGA TTTGTCTGGA GCTTCTTTGG 000480 000481 AAGAGGACAC CCACCCTGGT ACCTGGTCCC TGGCGAGAGA TGTCCACTTT CACGTAACTG TTTTCTGAGT TGTGGAGGAA 000560 000561 ATATGTTCCC TGAAGGTGTG TGGAGAAGCA TGGACAAGAT GAGGAGCCAT AGAGAAAAGT GAGCCCATTC AGGCTTCATG 000640 000641 ATGTTGCAGA CAGCAGATAG AAGAATCCCG GACTTGACTG AAATATCTGA AGGGTTAGCT GTCCTTCTCA TGTGAGGAGT 000720 000721 TGAATTCATA TCTCTGATTT TTATCTTTCC AGGGCTTAAG CCTGGGCAGA GTTCTGGTGC ATCCAGAATC AGCCTTGTGA 000800 000801 GCAGAACAGT TAAGTTCTTG GGTACCCAGC CATGTAGCTT GAAAGACCAT GCTTTACCAG AACCCTACTG ATTAACCTCA 000880 000881 GCCTTCCCCC CTTCTTTCCT CCACATCTAG GGATCATGAC CACTATTGCT CGGGACATCA ACATCTCTAT AATGAACAGT 000960 000961 TGTAAATAAA TTCTTACCAA TGCTTTAATA |
Predicted Small Protein
Name | NONHSAT079975_smProtein_308:391 |
Length | 28 |
Molecular weight | 2896.3058 |
Aromaticity | 0.0 |
Instability index | 49.2296296296 |
Isoelectric point | 9.30401611328 |
Runs | 6 |
Runs residual | 0.0155662909286 |
Runs probability | 0.0237296119649 |
Amino acid sequence | MRIVKLEKNVASQAVAASVSHQSCPQN |
Secondary structure | LEEEEHHHLHHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |