NONHSAT080009

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT080009

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

1263 nt

Genomic location

chr20+:44834053..44835850

Exon number

2

Exons

44834053..44834878,44835414..44835850

Genome context

Sequence
000001 cagagggggt gcattgactt gcccaagact ccacaactga gctgggattt gaacccaggt ctcctctgat ttcaaagccc 000080
000081 ttgcagtttc tgctgcacca cactgtGGAG TGCTGGGTGG AGAAAGGAAG TGTTCGCTTC CTCTGCTGCA GTGTGGACTA 000160
000161 GCTGTTTTTG ATGATCAAAG GAGACTCACA ATGGGGCTAG GTAGGAACGT GGCTGGGCTG ATAAATGGCC AGTCTATCTG 000240
000241 CAAACCTGCC TAACTGAGAG GTGGGCCCAT CTGAGCACTT TCCTGCCTCC TTCTCAAGCC TTCTAAGGCT TCCCACTGCC 000320
000321 TAGAGGATAA AGTCCCACTT CTTCATGTGG CATTCAATGT CCTTCGCAGC CTGTCTCCAA GTGCTCCCTT GTCCCTTGTC 000400
000401 GTGAGCTTGT CCAGCTGGTC TCGCTGCTCC TGAACTTAAC CTCCTGGCTC CATGATTCTG TCCCTGCCAT CTCTCCTCCC 000480
000481 CATCACTCCA ACCTGGGGCA CACTCTCCCC ATTCCAAGCC TTGTCCTCTT CGTCCCCTTG CAGGGGCCTT TTGGGGCAAA 000560
000561 CCTCTGTCAC TCCCCTTCCT GGTGCATAAA CTACTCACCC CTCCCTGGAG CTCCTCAAGC CCCTGCCTCA GCCCAAGCCC 000640
000641 ACTTGGACCT GGACCTGTCA CTGGATTCGT TCACACGGGC CAAGCTTTCC CACTGGCCCA TGTCTGAGGC CATCATCTCT 000720
000721 GTGGCCAGTG CACAGGGGAG GACGCTGCAC CAGTTTAGGA ACTGCACTAA CCACAAGGAG AGTAAGAAGC AGGagtgaaa 000800
000801 tggccaaagg ctggattcag gaagtggaga aggcaaactc cacgtgggca gggatcctgt tttatcatct ctgcttcctc 000880
000881 actgcacaga acagtgccgg gcacaACTCA ATGCGGAGTT GCTGCCTAAG CCTGTGACCC TGAGAACGCA GGTGCTGCCA 000960
000961 GAATGGAACC CTTAGAGCGA GCTGGACTCT GGCAGCACAC ATGGCCTGTG AGGACCCCTT CTCTGTCTCC CACAGACCCT 001040
001041 CAATGGCCTC CCATttccat ttttgtaccc cacagtctgg gagctccacc ccagttctgt ccttggctga gtcatcttgg 001120
001121 tgtccccagg cctggctcag ggcctggcat ggaggaggag ctgggtaaat gtttgtGGTG TTAAATTGGA CCAGTCTCCA 001200
001201 GCTCCTCACT GCCTCCACAT CTGAGGAGCC CCAGGGAAGG GGCCGGCAAA GAGAGATGAA AGA
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Predicted Small Protein

Name NONHSAT080009_smProtein_962:1183
Length 74
Molecular weight 8124.2976
Aromaticity 0.0958904109589
Instability index 59.4123287671
Isoelectric point 5.79217529297
Runs 7
Runs residual 0.0482545293858
Runs probability 0.0434552199259
Amino acid sequence MEPLERAGLWQHTWPVRTPSLSPTDPQWPPISIFVPHSLGAPPQFCPWLSHLGVPRPGSG
PGMEEELGKCLWC
Secondary structure LLHHHHLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLLLLL
LLHHHHHLLLLLL
PRMN -
PiMo -