NONHSAT080192
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080192 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
453 nt |
Genomic location |
chr20-:47656697..47659980 |
Exon number |
2 |
Exons |
47656697..47657147,47659687..47659980 |
Genome context |
|
Sequence |
000001 CTCTAGTCCT AGGGAGAATG AGCCTGATGA CTTTACCATT TTCCACCTCT AAGAGCCAAT CGCAAAGGAG GCTGGCTGGC 000080
000081 ATCTTGTGTC TGTCTAGCAT CTCTACCAGT TTCTGTAGAA AACCCTCAAG CTGTGCCAAG ACGATCATGT CTGGACACAG 000160 000161 CTCTTGGTGT CACGGGGTGT CTCCTCCTAC TGCCTATCGC CCTTTGCAGC CACCAGAATA ATCATGCAGG AGCCAGGGCC 000240 000241 CCATATTATC TACCGCTGTC CATCTGCTCT CCAGCACATC AGAGCAGCCC TTCCCCTGTG TGAGATTCCT CTCCAGGGCA 000320 000321 AGACTTGAAG GGAGCATCAA GGTTGCAGTG GAAGAAATAA ATTGGAAGTG GAGCTGGGCA GTTATTTATT TATTTAAATA 000400 000401 GAGACAAGGC CGAATGCGAT GGCTCACACC CGTAATCCCA GCACTTTAGG AGG |
Predicted Small Protein
Name | NONHSAT080192_smProtein_17:220 |
Length | 68 |
Molecular weight | 7258.3679 |
Aromaticity | 0.0597014925373 |
Instability index | 95.1746268657 |
Isoelectric point | 9.79302978516 |
Runs | 10 |
Runs residual | 0.0059388919278 |
Runs probability | 0.0410174880763 |
Amino acid sequence | MSLMTLPFSTSKSQSQRRLAGILCLSSISTSFCRKPSSCAKTIMSGHSSWCHGVSPPTAY RPLQPPE |
Secondary structure | LEEEELLLLLLLLHHHHHHHHEEEEEELLLLEELLLLLLLEEEELLLLLLLLLLLLLLLL LLLLLLL |
PRMN | - |
PiMo | - |