NONHSAT080262
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080262 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
728 nt |
Genomic location |
chr20-:48711452..48729702 |
Exon number |
4 |
Exons |
48711452..48711919,48713020..48713071,48713209..48713357,48729644..48729702 |
Genome context |
|
Sequence |
000001 GAAGAAGGGG CCGGCCTTCA AGCAAGAGCG ACGCAAGATG GCAGCCACCA CGGGCTCGGG AGTAAAAGTC CCTCGCAATT 000080
000081 TCCGACTGTT GGAAGAACTC GAAGAAGGCC AGAAAGGAGT AGGAGATGGC ACAGTTAGCT GGGGTCTAGA AGATGACGAA 000160 000161 GACATGACAC TTACAAGATG GACAGGGATG ATAATTGGGC CTCCAAGATT TCAGTTTATA TATTTGAACC CCCTCTGATG 000240 000241 CTGTTTAACC CCTCTAAATG AATTTTCTGC GTCTGCTAAA TACCGGGGAA AACCCAATCT AGAAATCCTG TTTCTCCATG 000320 000321 GAGATAATTT TCTTTGCTGT CTCTGAAGGT CCATCATATG CTGACATCTT CTTCACTGCA TGTCTTCTCT TCCTAAGAAT 000400 000401 GATTTCGGTT TCTTGAGGAT GAGAACTGTG CTTCCCTCCT TACTTCCCAG AATACCTAGA AATGACTCAG AATGGGGTAC 000480 000481 TCAGTAGATT TGTTAATCAA CTTACTGATT TACAGGTTCT AAAATACTGA GAATTGAACC AAtgtacaac attgcgatac 000560 000561 actaaatacc actgaattgt acactttcaa aAAAACACAC AAAACAATGC ATCAGTAAAT TCTGCTGAAA ATATTCTGTC 000640 000641 TGCCTAAAAC AGCTTGGGCT ACCCTGAATT TCAGTTTATC TCTTTCCAAA AGAGGCTTTG GAAGTTGTAA TGCGTAGCTA 000720 000721 CGGTATGC |
Predicted Small Protein
Name | NONHSAT080262_smProtein_317:415 |
Length | 33 |
Molecular weight | 3619.272 |
Aromaticity | 0.1875 |
Instability index | 58.259375 |
Isoelectric point | 4.13690185547 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0246599540717 |
Amino acid sequence | MEIIFFAVSEGPSYADIFFTACLLFLRMISVS |
Secondary structure | LEEEEEELLLLLLHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL |
PiMo | ooooooooooooTTTTTTTTTTTTTTTTTTii |