NONHSAT080295
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080295 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
626 nt |
Genomic location |
chr20-:48916459..48923364 |
Exon number |
2 |
Exons |
48916459..48917000,48923281..48923364 |
Genome context |
|
Sequence |
000001 ccgcatgtgg agcagggaag gaaggatatc tggttgggat gctgtggaga gtgaggagcc ggggcaggga gcagctagag 000080
000081 tcagAaccaa gaagtgaatc acggctggcc ctgcccttga gaagctcaca atcaagtgat ggaaacagac agctacaacc 000160 000161 caagatggaa aatattcaga agtcaaaggg agctccaggc aggtgccttc acagaagggg actcaggtcc ttctagggat 000240 000241 tcagagaagg ctccttggag gaagcagcat ccaaacagga ctcatgaagT CAGAAAAACA GTGAACAAAC TCCCTTAGAT 000320 000321 ATCCCAGAGG GTAACTCACA GGACCTAACC ACCTAGATGC TCATTGAGCT CTTTGGAGCA TCCAAGACTG AGAACACCTG 000400 000401 TGGCAAATGT TCACCCAGGA ATTCCCAAAC CCAATGGCTA ATGGAACACT TTCCCCCTTG TCACTCCTAT TAGTACCCCC 000480 000481 AGAGACTCTG TGTCCCTCAG ATCTGTGTCC TCAAAATGGA TAAATGATAA AATAGATTTG GGAAATGCTA GTCTGGTCCA 000560 000561 AACTTCTTGT TTCCACAAAG AAGAAAACAA AGTTCCACAA AACATCTCTG ACCTCAAAAA TTGTGT |
Predicted Small Protein
Name | NONHSAT080295_smProtein_38:235 |
Length | 66 |
Molecular weight | 7546.5226 |
Aromaticity | 0.0307692307692 |
Instability index | 118.536923077 |
Isoelectric point | 11.7086791992 |
Runs | 7 |
Runs residual | 0.0425961538462 |
Runs probability | 0.0388371564843 |
Amino acid sequence | MLWRVRSRGREQLESEPRSESRLALPLRSSQSSDGNRQLQPKMENIQKSKGAPGRCLHRR GLRSF |
Secondary structure | LEEEEELLLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLL LLLLL |
PRMN | - |
PiMo | - |