NONHSAT080297

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT080297

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2266 nt

Genomic location

chr20-:48927248..48937879

Exon number

3

Exons

48927248..48927786,48929451..48930893,48937612..48937879

Genome context

Sequence
000001 AGGGCAGGGC TGCCTCCCAC GGCAGGGGCA GGCAGAGGCC TCTGCGCCGG GTACAGCCTA GGTACCGCCT ACCCCCATGG 000080
000081 CTGACCCTGG GCCCCAAATC CAGCGGGAGG CCTGGGAGCA TCTTCTCCGC CTGAGTCACC GGGCTGGGCC CAGGACCCCA 000160
000161 GCCAAGGGCT TTGCCTCTGG GAAGAAAAGA GCTTTGGAGT CCAGCAAAAC CTGGGAAGCA GGGGGAAGCT TCCCTAGCAG 000240
000241 GTGCTATTTG AGCAGAGGCC TGGAGGAGGG AGACTAGCAA TTATTTGGTC TTCGAGGCAA GTTAGCACCA CACAGAGACT 000320
000321 CTTCTGGATA TAAAGGAAAG ACTGTAAAGA ATTTGCAGAG AGAATAACTC TCGCTATGTG ACCCGAGGTG ATTTTATGCT 000400
000401 TTGCCTGTGC AGCCTATAAA ATAATCTTGT GTGGTCCCCA TGATGCACAT CAACCAGGAG ATGCTGGAGA GTCTGAGACA 000480
000481 GCGTGCTGGC AGCACTCTGC TGGGGGAAGG ACACGGAGGT GTCCAGGCTC GGCTCCAAAA GCAGACAAGC CTGCACTGCG 000560
000561 CTGGAGCAGG TGAGAAGTAG CTGGGTTCCA CCGTGCCCTT TTCGTCTGTG TCCCTTGCCA CCCAACACGA GCTCAGCACA 000640
000641 CAGTTGATCT TCACTAACTA GTCACCCCTC CAAGCTTTTG CAATGGTTGT TCCCTCTGCT AAAGATACCC CCTTCTCCCA 000720
000721 CCTTGACCAC CCGACTAACT CTTAAGCTCA GCTCCCAGGT GCCTCCTCCT CCTTCTTCTT GGTACATGAG TGCCCCGCTT 000800
000801 GGCATTCGCT TAGGGGTGTC TATACACACT ATTTCCTCTG CCTGGAGTAT CTTCTTCCAT GGGGCAGGGG TCAGTCAGCA 000880
000881 CCTTCTGTAT GCAAGGGACA GAAAGCCAGT CCCAACTGTT TTCAGCCAAA AATGGGAAAG ACAGTGGCTC ACATAACTAG 000960
000961 AAAGTTGAAG GTGCCTAATT TCAGGTACAG TGGGATCCAG GAGTTCAAAG CCTGTCCAGC TCTGTGCTGC TTCCTGTCAG 001040
001041 GCAGGCTTTT CCCTTGTTTT GTCCTCTTCT TCTCTAAGCG TTCACTTGCT CACTGTCCAT CCAATGGAAA ATGGCATCTC 001120
001121 CTTCACAAAT CATGGCCAAC CCTGAAGTCC CAAGATCAAG TTTCATTGGG CAGGCTCAGT CATGTGCCCA TCCCTGGACC 001200
001201 AATCACTAGA GCAAGACCCG GTCACATGTC CACCCCTGGA GACAGAGGCC TCTGGGCACC CCCAGCCTCA TGGACTGAGA 001280
001281 AAAGGGAAGA GGGGGTTCTT CAGTAGGAAG TCGAGGTGCT GTTACCTGAA AATGGGAGAT AGATGCTGAC TTGTCCACAC 001360
001361 ACCCGCACCT TCTCCCAGCA AACTCTAGCT CGTCTCTGCA CATTGTATGA CCTCAGGCCA ACCCCTTCCC CTCTCTGGGT 001440
001441 CTTATGTTCC TCCTCCGGAA AATGGGCAGG AGGCCGTTTG AATTCCAACA TTCCAGAATT CTGGGACAGC TTCCAGGACT 001520
001521 GGAGTCAGCT CCCTAGATCC CAGGAACGTT CCAGCACTTC TGGGGACGGA AGTGGAGCAT CAGCCAGAGC CCTCCCCGGC 001600
001601 CCCCGGCCTG GGAACATGTT TAGAAGATGA CAACTGGGCT CCCTTTGGCC GAAATTCCAC TCCCGTGGGG GCCTTGCCAA 001680
001681 GGAAAATAAG CCCAAGAACC AGGCATTAAA GAGTACTACA GCCTGGGTAA TTTACAAAGA ACAGAGATGT ATTTCTAACA 001760
001761 GTCCTGAAGG CCGGAGAGCC GAAGATGGAG GGGCTCACTC AAGCAAGGGC CTTCTTGCTG TCATCCCATG GCGAGGGCAT 001840
001841 CCCATGGCAA GAGGTGGCAC GTGAGACAGC AAGGAATGGC CGAACTCACT TTCATGACAA ATCCACTCTC TCCATCATGA 001920
001921 AGCCACTCCT GCAATAATGA TACTAATCCA TTCATAAGGG CAGAGCTCTC AGGACCCAAC CACCTCTTAA AGGCCCACAT 002000
002001 GACCTTTGGG AGACACGCTG AGACCCTGGC GGTGCGGGGT GAGGACGTGG CCCCTCCCCA GGGCACTGTG GTTGTTTCTC 002080
002081 ACACATATGC CAGATACTGC GCCTCGCAGC CACTTCGTCC CCATTGCCTC AGTTTGAGGC CAAAAGTGAC ACATCAGGCC 002160
002161 ACAGCCACCT ACCCCGTCAG CCATCTCAGC CTCCGTGACC TGAAGGGAAA TGATGAAAGA CTTTTCTAGA AATAAATGAT 002240
002241 TTTTAAAACA AAAAAAAAAA AAAAAA
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Predicted Small Protein

Name NONHSAT080297_smProtein_785:955
Length 57
Molecular weight 6365.2875
Aromaticity 0.125
Instability index 41.4553571429
Isoelectric point 10.9313354492
Runs 12
Runs residual 0.060987509758
Runs probability 0.0397235470766
Amino acid sequence MSAPLGIRLGVSIHTISSAWSIFFHGAGVSQHLLYARDRKPVPTVFSQKWERQWLT
Secondary structure LLLLLLEEEEEEEEEELLHHHEELLLLLLLLEEEEELLLLLLLLEELLLLLEEELL
PRMN LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiii