NONHSAT080456

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT080456

Source

NONCODE4.0

Same with

,

Classification

intronic(AS),sense

Length

2193 nt

Genomic location

chr20+:55090750..55093943

Exon number

3

Exons

55090750..55092045,55092162..55092257,55093143..55093943

Genome context

Sequence
000001 GGAAAAAATG CATTTCAAAG GAAACTACTA GAAATGTTCA TATTCCCTTT GACCATTTTG CTTTCGTGAG TTTTCTCTGT 000080
000081 CACAGGTTTC CTGCCAAGTT AATTCAAAGC CCAGTGGGAC TAACATGCTC CTCTCTGCAA AATATTCTCC AGAGCTTCTG 000160
000161 GGAATACCTC ATAGCTACTG CTACCAGGAT ACCAAAATAT TTCCCAAATA CACTTGCAGC TGGAAGCAAG ATATAACATT 000240
000241 TCCTCTCTAA CTCCTTCTTG CCTGTGCTTT TCAAATAACC TCAGCTGTGA ATGGAGGGCT TAGAAGTAAA CAGTTGTCTC 000320
000321 TTATTTGTTT GAAGGACCGA GTATCAGTTT TCACAGATGT GAATGCTTGC ATTGCATGTG TGAAATGCAC AGAAGGTCTT 000400
000401 TATGTTCTGT TATAAATCAC ACTGCATGTA TATGTTAGAA ATTCAAGGCC TGAGAGGTCT TTCTTTAATG CTCAGTGCTG 000480
000481 GGAGATGGCT GAAGTAATCA GGCTGCCTAT TTTTAGTGCC ACCTTTTGGA TGCTTAGGAA ATTGACATTT TAAAGTAAAT 000560
000561 TAAATGAACA TAGTCCTACT TGTCATTTCT GCGATTAAAT CAATTCCAAC GCAGCTGTGT GACCGTAGAA TGGTTTGTTT 000640
000641 TATTATTGCT GATCAAAATA ACTATTATGA GTAGCAGAAT TCTAGTGCCT GGAAATCTAA CAAGAGTAGT TTTGAGTTTA 000720
000721 GAAGAATTAG CTCAACTGTC TTTAATATAA ACTTCAAGGC CTTACACTTG AATAACAAAT ACCAAAGCAG TTTGACAGCT 000800
000801 TTGAAAAAAA GTTAGTGGAA TGTGCAAGAT TTAGTTGGTG TTTATGCTGG CTGGACTTCA CATACCCATA TATACTCTGT 000880
000881 GTTACTCATT TAAGTGCGCT TTTGTATACA GTTGTCACCA TCAACATTGG CCCTTATTAC TGAAATCTGT CAGCCTCATT 000960
000961 TAAATTTTTG CAAATGTGAT TTGGGAGATG TAAATATAAA AGTGAGCAGC TCTGTGCAGA TACATTTTTG TGTGAGGCAG 001040
001041 AAGTGCATGA CTGGTGTCAC ATGCAGAGGG TGAAGGCTTT AGGAGTTACG GAACATCAAA AGCCTTCTTC AGAGTGACTG 001120
001121 TCTGTCTCAT GTGACTAGCA TCGGTCAGTC AGACAGGGCA CCCGGGACAA TGGGCAGCCA CACTGACGCT GAAGTGGAGT 001200
001201 GAATCTGAGC ACAGCCTCCA ACATTCTCTA TCTTTTTGTA GAAAACAAAG AAACCCAAGG CAGCAGAGTC TGTTTCAAAA 001280
001281 CCAGATGTCA GTGAAGAAGC CCCAGGGCCA TCAAAAGTTA AGACAGGGAA GCCTGAAGAA GCCAGCCTTG ATTCTAGAGA 001360
001361 GAAGAAAACC AACTTGGCTC CCAAAAGCAC AGCAATGAAT GAGAGCTCTT CTGGAAAAGC TGGGAAGCCT CCGTGTGGAG 001440
001441 CCACAAAGAG GTCCATCGCT GACAGTGAAG AATCGGAGGC CTACAAGTCC CTCTTTACCA CTCACAGCTC CGCCAAGCGC 001520
001521 TCCAAGGAGG AGTCTGCCCA CTGGGTCACC CACACGTCCT ACTGCTTCTG AAGCCCGCAC TGCCACCGCT CCTGCCCCAG 001600
001601 AAGGTTGTTT AGTTTCCACG TAGGCAGGTC GCTTTGTGCC TCTGAGTGCG CTGCTGTGTG TTCTCTCTAT AGTTCTGTGT 001680
001681 CATAAAGCTG TCCTGGCCAG CCTTCAAGCT GGTGTGGCCA CTCTTGATGT GAGGCGTGTC GGTTCCAGGG GGGACATGGG 001760
001761 AGGGGCTGCA CAGTGGCCCG AGGTCATGCT TGCTTCCACC TGCAGGTGCA TTTGGTCCTT TCCATGGCCA GGAAGCCCTG 001840
001841 TGGGCTGCAC TTTTTATGCT TGCAGTAACA AGAGACTCCA GAGTCCTCAC CGGTGCAGAG TTGGCACATA TTAATTAACT 001920
001921 AAAATTCTAA TGATCTTGCT ACCAGCAATA AATCAAGTAG GCCAAGTGAA ACTGGGCTTT AAAAAGGATG GATTTCAAAT 002000
002001 ACACTGTGCC CACTAGAAGC TTCGAAGGGC CTCGTCCCTC TGCTACAGCC CTGGGAGGAG CCAGGATCCT TGTTGGTCTA 002080
002081 GCTAAATACT GTTAGGGGAG TGTGCCCCAT CTCATCATTT CGAAGATAGC AGAGTCATAG TTGGGCACCC AGTGATTGGG 002160
002161 TTCAAAAATA AAGCTGGTCT GCCTCTTCTC TCC
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Predicted Small Protein

Name NONHSAT080456_smProtein_1394:1570
Length 59
Molecular weight 6326.8431
Aromaticity 0.0862068965517
Instability index 66.025862069
Isoelectric point 7.82049560547
Runs 7
Runs residual 0.035903751421
Runs probability 0.0305852070558
Amino acid sequence MNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEESAHWVTHTSYCF
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLLLLLLLLLLLLEEEELLEEEL
PRMN -
PiMo -