NONHSAT080461
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT080461 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
770 nt |
Genomic location |
chr20+:55123378..55130555 |
Exon number |
3 |
Exons |
55123378..55123576,55125578..55125658,55130066..55130555 |
Genome context |
|
Sequence |
000001 TGTGAGCAAG CCCCTTCCTC TTCTGAGCAA TTCCTTACTT TCTGGCAACC CAAGATGCTC CATGCTCATC TGGTTCATTG 000080
000081 CCTGCCTTCG TCCTGGAATC AGCCACTTCC CCAAGGGGCC AGGTTCCTTT TCTTGGAGAA TGGTGTTTAG AAGCCAGGAC 000160 000161 CTGGTTACTG GGTGTGCTTG TTGCTATTGG GCTGCTATTG CCTGTGTATT TTGGTATTGC TGAAGCTGTA ATTTCAGGGT 000240 000241 AGATACCTAG AAGAGTGATC GTAGGTTAGA AAGGTAAGTG AATGGCTTAC ACTGGACTAA TTTTAGAATT TCTAAGTACA 000320 000321 TTTAAGTGAT GACTCATCCC ACTTAAATTC AAAGCTGTTT GTTGTGCCAT CTGGCTCATC AGAACATGAA AGACTTCTCC 000400 000401 TGCAACCTGG AAAAAGGCCA GAGAGGAAGA CGAATGGAGG AGTCAACCCC ATGGGAATGC TGACTGAGTG TTAGCTCCCC 000480 000481 GTGGACAGGA ATGTCACTGC ATGAATAGGC TGCAGTATGT CTGGGCCTGT TTTTTTTTCA TAAAATGTTC CCCCCCTGTT 000560 000561 TTTTTCTTAT TCCAAAGCAA TGCAACAAAA AGCACAAGAA ATCAAAAAGG AAAAAATAGA TATTGGACTT CATCAAAATG 000640 000641 AAAAACTTTT GTGCTTCAAA GGAAATGGAA AGAAAGTGAA AAAACAACTG AGGGAATGGA AGAAAATATT CTCAAATCAT 000720 000721 CATCTAACAA AGGTTGTGTT AGTCTGTTCA GGTTGCTGTA ACAAAATATC |
Predicted Small Protein
Name | NONHSAT080461_smProtein_500:640 |
Length | 47 |
Molecular weight | 5557.3932 |
Aromaticity | 0.217391304348 |
Instability index | 41.5260869565 |
Isoelectric point | 10.3991088867 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0377362656774 |
Amino acid sequence | MNRLQYVWACFFFIKCSPPVFFLFQSNATKSTRNQKGKNRYWTSSK |
Secondary structure | LLHHHHHHHHHEEEELLLLEEEEEELLLLLLLLLLLLLLEEEELLL |
PRMN | - |
PiMo | - |