NONHSAT080484

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT080484

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1037 nt

Genomic location

chr20-:55731074..55732302

Exon number

2

Exons

55731074..55731770,55731963..55732302

Genome context

Sequence
000001 GGCTCCACGT CTGATTGTGC AGGCATGGCG GCAGCGGCAG AGCCTGGCAC ACCTGGTATG TGACACCCAA CCAAAGCCAC 000080
000081 GGTGCACAGG CACCTGCTGC TGCCTCTGCC GCCATGTCCT CAGCCAGAGT GGGCCCTGTG AACTCCTCCT CCCAGCCTTG 000160
000161 CCCAGCCGTG ACCTCCTTGT CCCTGCTTCA GGGACAGGGA TATTGAAGGG TGCTCACCTT CAATATCGTG CCTTAAGCAT 000240
000241 TTCTGTGGCT GCCCACAGTT CATCATCAGA ATGCTTCTTT TGTTCACATT TATTATTCTT GGTCCTagat ttggaaataa 000320
000321 agaacggcac acaggaaaag ACCCCCCTGC AGCCCCGTCT TTGATGGCTG CCTGGACCAC CTGCAGGAGA AGCCCCTCAG 000400
000401 AAGATGGGTC CCTGGAACCT TTGCGCAGGT TTGCTGAACC TCAGGAGTTC ACTCAGCACA TCGTTCGCTC TCAGCTGCCC 000480
000481 CAGCAGGAGC TGCGCAGAAC CGCCTTGGAG GCGTGCTCAG AGGACACTTC CTCACTTTTA TAATGAATCG TGAGCACTCT 000560
000561 CTCCTCGCTT TGGCCGGCAG AGCCTGCCTT TCTGGCCACG TGGACGTCTT CATGCAGGGT CCTGCTGGCC CCTTGACATC 000640
000641 AACAGGCATG AAGCTGCAGC CATCCTCTCC CCTCCCCAAG TTTTGGGCAC CACCATCTCC TAGTCTCTTG AGACTGGCCC 000720
000721 CTGGCTTCTC CCGTTACCCC AGCCTCAGTC CCATCCAATC TGCTCCCCAT TGAGAAGTCC AAGTGGACCC TCTTCTCCGG 000800
000801 CCTCACTGCC CCCAGCCCAC TCCTTGGGCT CCATCCCAGC CTCTTCCTTG GCGGTCCCCC AGCTACTCTC CAGTCCTACG 000880
000881 TGCAGCTGCA TCTTCCAGAT CCACCTGGCA CGGCATCTCC TTCTGCCTCA ATGCCTGGGA TTCAGGACCT TGATCACAGC 000960
000961 TGGGTTTTGT ATAGAAATAA ATaaataaaa ctgaaagaaa aaaacacgaa atgttaatat tgtttatatg aggttgg
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Predicted Small Protein

Name NONHSAT080484_smProtein_542:772
Length 77
Molecular weight 8062.2944
Aromaticity 0.0657894736842
Instability index 73.5368421053
Isoelectric point 10.2844848633
Runs 7
Runs residual 0.0493042952208
Runs probability 0.0277588512883
Amino acid sequence MNREHSLLALAGRACLSGHVDVFMQGPAGPLTSTGMKLQPSSPLPKFWAPPSPSLLRLAP
GFSRYPSLSPIQSAPH
Secondary structure LLLHHHHHHHHHHHHHLLLLLEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLL
LLLLLLLLLLLLLLLL
PRMN -
PiMo -