NONHSAT080720

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT080720

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1293 nt

Genomic location

chr20-:60809963..60813274

Exon number

3

Exons

60809963..60810243,60810805..60811328,60812787..60813274

Genome context

Sequence
000001 GCAGAGTTGA CAAACAGTGA GTCAGGTGGC CCGGGGCGTG GGTGCTCCGC CCTCAGGTGC ACTGCGTCCT GGCGGCAGTG 000080
000081 CGGGCCTGCG AGGCTACCCA AAGCCCTGGG GGCTTTTTCC TACAAATGCT GGGGACCGTG CGATAGCTGG GGCGTAGCTG 000160
000161 CTTCCACTGT CCTACCAAAT CCTGAATATC GTCCACCTCC TTTGCATGCC ATTCACCGCC AACCAAAATC CAGCGCCAAT 000240
000241 TTACCCCTCC AGCTGCATCC CCGACCGTTT CACCACCATA CTTAAAACCC TTTGGACTCC CACTGACCTA CAgtggctcc 000320
000321 agggttaagc ccagaagttc tggaatcaga cctggagctt gcattcttta ccagctgtgt ggatttggac aaattaatta 000400
000401 acctctctga gtctgtgatc actcagtttc atctgcaaac cagggTTCCC CTGTCAACAT CTCATTGAAG TCATGGGTCT 000480
000481 GGTTTGAGGT CACGAGGCCA ATTCAAGAGG CACAGTTCTC CAAGGATGGA AGATGGGGGT GGAGAAGGCA ACAAAGATGG 000560
000561 ATGAGCTGGG GCCatgatga tgaggatgat gatgttgatg atgatgatgg tgatgGCGGC CGAGTGCCCT GTGAtttaca 000640
000641 ggcccatctg gtttcatgtt tgcaacagcc aatcaagtgg gtaccaggtg ccatcattcc cactttacag atgagaagac 000720
000721 tgagccccag acaggttaag tgactccccc aGCCCTGCAA TGAGGAAGGG CCCAGCACAG CTCCAGGCAC AACAAGCAGG 000800
000801 CACTCCAAGC ATAGGGAGGT CTGGTGGACC AGGCCTGGCC CAGGAGCTTG TCGGCAAGGC AGAGCCGCAT CCAGGCTCCC 000880
000881 GGACCAGGAT CCGCACACGA ACAACAGGCC CAGGAGTTCC CATGGCTGTG GCTGCTGGAC CCCCGCACCA GGTGGGCTGG 000960
000961 CGGCTGTGTC CCACACATGC TCTCTAGAGC CTGAGAAATG CTCATCCTGC AGGCACTCCC CAGGCCTTTA GAGAGGACAT 001040
001041 TCTCCCACTC TCTTTTATGG AAAGCCATGG AATCTTCTGT GTGGATGCAG CCTGGGCAGT CAGAGAGGGG CCTGGCCCTC 001120
001121 ACGTGGCCGC AGCTGACCCC TCCCCGCCGC AGCTCTCCAG TCTCCTCTGC GACGTGACAG CCCTGGCTTC TCTGCTGTGG 001200
001201 GGAGGAGAGT ATTTTTAGTT TTGAACCCAC CACGTGAAGC GAGACAAGTT ATCAATAGCA GCAGCAAAGG GCTTTTTCTT 001280
001281 TCTCTCTCTC TTT
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Predicted Small Protein

Name NONHSAT080720_smProtein_560:742
Length 61
Molecular weight 6726.4402
Aromaticity 0.0333333333333
Instability index 67.6166666667
Isoelectric point 4.39923095703
Runs 9
Runs residual 0.000265957446809
Runs probability 0.0416593063652
Amino acid sequence MSWGHDDEDDDVDDDDGDGGRVPCDLQAHLVSCLQQPIKWVPGAIIPTLQMRRLSPRQVK
Secondary structure LLLLLLLLLLLLLLLLLLLLEELHHHHHHHHHHHLLLLEELLLLLLLLLLEEELLLLLLL
PRMN -
PiMo -